Gene Dhaf_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1858 
Symbol 
ID7258827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1984266 
End bp1985450 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content51% 
IMG OID643561755 
Productpeptidase M24 
Protein accessionYP_002458335 
Protein GI219667900 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAG CTGAAAGAAT CAGGAGGCCC ATATCCGACC GGGAACTCAG AAGAAGATGG 
GGCGCAACGA AGGAGCTGTT GAAAAAATAT GATCTGGACA GTGCCTTTAC TCAAGGCAAC
AACATGCACC TGGGAGGATA TGTCCGTTGG CTGACCGATG TACCAGCCGA ATATAATTAT
CACATGACGG TTTTATTCCC GGCAGATGAG GAAATGACCC TGGTCAGAAC CAGCGGCTCC
CCAATTCCTC AATGGGCTTT GAGAGGAGTC AAAGAAGTAC TCTATGCCCC ATTTTGCCCC
ACCCTGAATT ATACGGCTGA CCTGGAAGCG GGCCTGGTCA TCGACTATCT GCGCAAGAGA
AACCCCAAAA GAGTGGGCTG GATCGGCAAA GCTTCCATCA ATGCAGGACT GATGGGAAAA
GTACTGGCAG CATTCCCGCA TATCGAATTC GTCGACATCA CCGATGAATT CGATATGATC
AAAGGGCTGA AGAGCGCTGA AGAAATGGAA CTGGTCCGGG AAACGGCCAG AATACATGAT
GCGGTATGGG CAGCGCTGCC TGCCATTGTC AAACCCGGCA TGATGGAGTA TCAGATCAGA
GCGGAGGTCA TGCAGCTTCT GATGAACCTG GGAAGCGAAG AACACCTGCT CTTCATGGCC
ACGGCGCAGC CGTACAAACC TTGCGGCATG TCTACCTTCC AATATGCCAA CAGAAGAGTT
CAGGAAGGAG ACTATGGTGT GCTCCTGGTG GAAGTATCCG GCCCCGGAGG CTACTACTGC
GAATCCGCCA GAAACTTCTG CTTCGGGGAG CCTTATCAGG AATTGCAGGA AGCCTGGGAC
GTAGCGGTAC AGGCTCAGCA ATTGACTGCG GACCTTTTGA CTCCCGGCAG GCCGGCTAAG
GAAATCGTCG CCAAATACAA TCAGTTTGTC GCCGAAAGAG GCTACAGTCA GGAAGGGCGC
CTGTACGGAC ATTCCCAGGG CTATGACCTG GTTGAGCGTC CTGCCTTTAT GGCAGCCCAT
GAATTTGGCG AAGAAACCAT GGAAATCAGG ACCGGAATGA ATATCTCCCT GCACCCTTAT
TTTATTGATC AAGTGCAAAC CGTATATATC AACGACAATT ATTATGTGAC GGAACACGGT
GCAGAGAAAA TTCATAAAAC AGCTCCCAAG ATCATTATTC TCTAA
 
Protein sequence
MSAAERIRRP ISDRELRRRW GATKELLKKY DLDSAFTQGN NMHLGGYVRW LTDVPAEYNY 
HMTVLFPADE EMTLVRTSGS PIPQWALRGV KEVLYAPFCP TLNYTADLEA GLVIDYLRKR
NPKRVGWIGK ASINAGLMGK VLAAFPHIEF VDITDEFDMI KGLKSAEEME LVRETARIHD
AVWAALPAIV KPGMMEYQIR AEVMQLLMNL GSEEHLLFMA TAQPYKPCGM STFQYANRRV
QEGDYGVLLV EVSGPGGYYC ESARNFCFGE PYQELQEAWD VAVQAQQLTA DLLTPGRPAK
EIVAKYNQFV AERGYSQEGR LYGHSQGYDL VERPAFMAAH EFGEETMEIR TGMNISLHPY
FIDQVQTVYI NDNYYVTEHG AEKIHKTAPK IIIL