| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1799 |
|---|
| Symbol | |
|---|
| ID | 7258768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1924506 |
|---|
| End bp | 1925468 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643561701 |
|---|
| Product | malate dehydrogenase, NAD-dependent |
|---|
| Protein accession | YP_002458281 |
|---|
| Protein GI | 219667846 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA TATCAGTGAT CGGATCCGGA TTCACAGGTA CAACAACTGC TTTTATGCTG
GCTATGAAAG GGTTGGGAGA TATTGTTTTA CTGGATACCC AGGCAAACGA AAATCCGACG
AAAGGGAAAG CTCTGGATAT CATGGAAGCC GGTCCTTTGA CTCGTTCCAG TGTCCGCGTA
ACGGGTACCT CAGATTATCA GGATACACTT GATTCGGATG TTGTGGTGAT CACGGCCGGT
ATCGCCCGTA AGCCGGGAAT GTCGCGCAAC GAACTATGCG ATATCAATGC TGGAATCGTC
ACCCATGTCG TCCGGCAGGT TGTTCAACAT TCGCCCAATA GTACTCTGAT CATTTTAAGC
AATCCCGTGG ATATTATGAC CTACGTTGCT TTCAAAGAGT CGGGGTTTAA ACGGAACAGG
ATTATTGGAC AATCGGGAGT TCTTGATTCA GCGCGTTTCC GCTATTTTGT AGCCAGCGAG
CTTAAGGTAT CTGCCGAAGA TGTAACAGGA TTTGTTCTGG GGGTTCATGG GGACGATATG
GTACCGCTGG TACGCTATTG TTCTGTCCAT GGTATACCCA TTCAGCAGCT ATTGCCGGAA
GCTGAAATTG AAAAAATTAT GGAACGGACA CGTCAGGCCG GTTCGGAAAT CGTCAATTTA
TTAGGCAATG GCAGTGCTTA TTATGCTCCC GCTGCCGCCT TAACAGAAAT GATCGAGTCT
ATCCTGCTGG ATAAGCATCG GGTCATGCCT TGTATAGTTC ACTTGGAAGG TGAACTGGGC
TATCAAGACC TGGTGCTGAA TGTTCCCGCT GTGATTGGGC GGCAGGGAGT GGAAAAGATA
TTGCCCATCG ATTTACTGCC GGAAGAGGAG GACTTGATCG AACGCTCTGT TGCATCCATA
AGACGTGGTA TTGATGCAGT TTTAGAGGGG AAGACAAATA AGCGATGCAG TTTAATCAGT
TAG
|
|---|
| Protein sequence | MAKISVIGSG FTGTTTAFML AMKGLGDIVL LDTQANENPT KGKALDIMEA GPLTRSSVRV
TGTSDYQDTL DSDVVVITAG IARKPGMSRN ELCDINAGIV THVVRQVVQH SPNSTLIILS
NPVDIMTYVA FKESGFKRNR IIGQSGVLDS ARFRYFVASE LKVSAEDVTG FVLGVHGDDM
VPLVRYCSVH GIPIQQLLPE AEIEKIMERT RQAGSEIVNL LGNGSAYYAP AAALTEMIES
ILLDKHRVMP CIVHLEGELG YQDLVLNVPA VIGRQGVEKI LPIDLLPEEE DLIERSVASI
RRGIDAVLEG KTNKRCSLIS
|
|---|
| |