Gene Dhaf_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1793 
Symbol 
ID7258762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1917842 
End bp1918882 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content42% 
IMG OID643561695 
ProductTRAP dicarboxylate transporter- DctP subunit 
Protein accessionYP_002458275 
Protein GI219667840 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG TGTTGGGGTT AGTGCTGACC CTTGCTTTAA GCCTTACCTT CACTGGATGT 
GCTTCAAAAA CCAATAATAA TGGAGACTCT GCGATGGCAG GGTCAAACGA AAAGCAGATC 
GTTATGAAAA TAGGACACAC CCAAATTGAA CAAAGTCCGC GCCACGCCGT GTCACTAAAG 
ATAAAAGAAT ATGTAGAAAA AGAAAGCAAC GGCAGAATAG CTGTGCAAAT TTATCCGAAT 
TCCCAACTTG GCAATTCAAA GGAGCAAGTT GAGGGTTTGC AAACAGGATC TATTGAGATG 
GTTGTTTTCC CGACAACATC GGTAACAGAT TTCCAACCCA TTTTTACTTT GCCTGATATT 
CCCTATCTGT TCCCTACGGA TCAAGAGAAG CTATTAAAAC TGTATAAATC TGACGCCTTT 
AAAACATTTA TGGCTGCAGG CGACGACAAA GGGTTCAAGG CCTTAGCCAC CTTGTTTGAA 
GGCTATGCAA CAATTTCGTC TAAGATACCG GTTACTGAAG CAAGTCAGCT AAAGGATATG 
AAGCTTCGCA TTATCGGCAG CAACATTGCT AAAACCTATT ACACCAACTT AGGCGTTCCT 
CCCAATGTTA TTGCATTTTC CGAAGTATAT ACCTCATTAC AAACAGGCCG GATCAATTCA 
CTGGATATCC CTATCTCCCA GATGTATGAA AACAAGTTCT ATGAAGTATG TGAAAACATG 
ACGGAGACGA AACATTTTGC CTTAACAAGC CTGGTCATGG TTAATAAAAG CTGGTATGAC 
GCTCTTCCCG AAGATCTGCA AAAGATTATT GGCGATGCTG CAGAAATGGC TGCTCCTGAA 
GCAGCCAATG TGGTTAACGC TACGACAGAA AAAGCCAGGA AGGATATGCC GGGAGTTCAA 
TTCTATCAAC CAACCGATGA CTTGGTCAAT CAACTCAAAG AGCAAACCGG CAAGATGGAA 
GAGGAATACG TAAAAGTAAA TGGAGAAAAA GGCAAGCAAA TTTTAGATGG GATTAAACAG 
GCGGTTCAAG TGCTGAATTA A
 
Protein sequence
MKKVLGLVLT LALSLTFTGC ASKTNNNGDS AMAGSNEKQI VMKIGHTQIE QSPRHAVSLK 
IKEYVEKESN GRIAVQIYPN SQLGNSKEQV EGLQTGSIEM VVFPTTSVTD FQPIFTLPDI 
PYLFPTDQEK LLKLYKSDAF KTFMAAGDDK GFKALATLFE GYATISSKIP VTEASQLKDM 
KLRIIGSNIA KTYYTNLGVP PNVIAFSEVY TSLQTGRINS LDIPISQMYE NKFYEVCENM 
TETKHFALTS LVMVNKSWYD ALPEDLQKII GDAAEMAAPE AANVVNATTE KARKDMPGVQ 
FYQPTDDLVN QLKEQTGKME EEYVKVNGEK GKQILDGIKQ AVQVLN