Gene Dhaf_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1730 
Symbol 
ID7258699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1857699 
End bp1859129 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content48% 
IMG OID643561632 
Producttrimethylamine methyltransferase 
Protein accessionYP_002458212 
Protein GI219667777 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5598] Trimethylamine:corrinoid methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCGC TTGAAACGAT GGATAGTGAT TTAAAACAAA TTCACGAAGC CTCGATGATT 
ATCCTGGAAC AAACAGGTAT GCGGTTCAAC CACCCTAAAG TAGTGGAAAT GTTGAAAGAA
AAGGGCATCA AAGTTGAGGG GTCAACTGCT TTCTTTACCC GCACACAGCT CATGGAATGG
GTGAGCAAGG CGCCCCGTCA ATTTAAGATG TATGCCAGAA ATTCCAAGTA TGACTTTGAA
GTTGGCGGCG ACCATGTAGA GCTTTTGCCT GGATATGGTT CTCCTTTCGT GTGCAGTGCA
GACGGAAAAA AACGGGATGC ATTAATGAGT GACTATGTTA AATTCCTTAA GCTTTTTCAT
CAGTCAGAGC ATCATAAGGC CAATGGCGGA GTAGTGGTTC AGCCTAATGA CATCGCAAAG
TCTCAGATTG TGGCCATGCT TTATGCCGCG ATAGTGCACT CGGACAAGGT ACTTGTTGCG
GGTTCGGGCA GTGCCGAAGA TACAGAGAAG CTGATGGATC TGCTCGCCAT TGTATTTGGC
GGTAAAGAAG CTTTAATGGA GAAACCCAGA TGTCTGACCA TAGTCAATAC AAATTCCCCC
CTCCAGCTGG ATACCAATAT GCTGGATACC ATGATGGTGT TCAACAAATA TAAACAGCCC
ATCGTTATCG CCGCTTGTGC AATGGCGGGG ACGACGGCAC CGGTCACTCT TGCTTCCACC
ATAGCGATCA CCAATGCGGA AGTATTAGCG GGCATTGCCG TGGCCCAAAT GATCAATCCG
GGGACCCCGG TCATTTACGG TTCCCAATCC ACGACTTCCG ATATGAAAAC AGGAAGTATT
GCCTGCGGCT CGCCGGAAGG GGCGTTGTGC TATCAGTATG CCGCCCGTTT AGCCAAGGCC
TATGGTCTGC CTTGCCGGGG CGGCGGTGCC ATCAGTGATG CCAAGGCCTT GTCGGTTCAG
GCCGGGTATG AAAGTATGCT GACATTTTTG GCCACCTATA CGGCAAAAAC AAATGTCATT
ATTCATAGTG CCGGGATTAT GGACAGCTAC AACGCCATGA GTTATGAGAA GTTTATCGTT
GACCTGGAAA TCATCGGGAT GGTCAAACGC TATGTGGCCG GCTTAGCGGT CAATGAAGAA
ACCCTGGCCC TGGATGTGAT ACAGGAGGTG GGGGTAGCCG GAGAGTTTTT AAGTTCGGTG
CACACGATGC AGCATTGCCG TAAGGAGCCT TTCCTGCCTG ATATCAGCTT AAGAGGCTCG
GTTGCCGGTG ATCCTGGTGA AAGCCTCCTC AATAATGTCC AGAAAAAAGA ACATAAAATG
CTGGAAAGCT ACTGCAAGCC TGAAATGCCG GCAGATATAA AGGATAAGTT AACAGAGTAT
GTCCTTGGCT GCGGATTTAA TGAACAGCTG ATCAAGGAAC TTCAAGCATA A
 
Protein sequence
MMALETMDSD LKQIHEASMI ILEQTGMRFN HPKVVEMLKE KGIKVEGSTA FFTRTQLMEW 
VSKAPRQFKM YARNSKYDFE VGGDHVELLP GYGSPFVCSA DGKKRDALMS DYVKFLKLFH
QSEHHKANGG VVVQPNDIAK SQIVAMLYAA IVHSDKVLVA GSGSAEDTEK LMDLLAIVFG
GKEALMEKPR CLTIVNTNSP LQLDTNMLDT MMVFNKYKQP IVIAACAMAG TTAPVTLAST
IAITNAEVLA GIAVAQMINP GTPVIYGSQS TTSDMKTGSI ACGSPEGALC YQYAARLAKA
YGLPCRGGGA ISDAKALSVQ AGYESMLTFL ATYTAKTNVI IHSAGIMDSY NAMSYEKFIV
DLEIIGMVKR YVAGLAVNEE TLALDVIQEV GVAGEFLSSV HTMQHCRKEP FLPDISLRGS
VAGDPGESLL NNVQKKEHKM LESYCKPEMP ADIKDKLTEY VLGCGFNEQL IKELQA