Gene Dhaf_1619 details

Gene Information

• Locus tag: Dhaf_1619
• ID: 7258588
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 1729054
• End bp: 1729629
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 643561522
• Product: Uracil-DNA glycosylase superfamily
• Protein accession: YP_002458102
• Protein GI: 219667667
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1573] Uracil-DNA glycosylase
• TIGRFAM ID: [TIGR00758] uracil-DNA glycosylase, family 4

Plasmid Coverage information

• Num covering plasmid clones: 77
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTCGT GTTTTGAACC GGTGATTTGG CCGGAAGATA AATTGCCCAA AGAAGCCGTC 
GCTTATAGGG AATGTGAAGT CTGCACGGAA AAAGCGCGGA TCATTTGGGG AGAGGGTAAT 
CCCAAGGCGC CTGTTGTTAT AATTTTAGAT AATCCAGGCG CCCGTGAAGA CAAAGATGGC 
CATGAATATG TCTGCGGCAC AAGGCAAACG TTGCAGACAG CTTTGCATCA AGCTGATTTG 
GCGCCGGATG ACATTTATAT AACGTATCTT TTAAAATGCC GGCCCCTTCG CCGATACAAT 
AAAGAAGAAG CCAGGACCTT CAGTAAACCC TTTCTGATCC AACAAATAAA AACCATACAG 
CCGCAATTGC TGGTTTGTCT GGGAGATACC GTTGTTCAGG CGATGTTTGA TGACCAGGAG 
GCCCACGTAA AGAATCTGAG AGGATCATGG CATGTTATAC TGGGATACCC CTGCATCGTC 
TCCTACCATC CCTTGGCAGT AAGGAGGCGG CCTAATCTGG CACGTCAGTT TAGAGAGGAT 
TGGGATATGC TGAGGCAGCG CTTATTAGAT TGTTGA 

 

Protein sequence

MDSCFEPVIW PEDKLPKEAV AYRECEVCTE KARIIWGEGN PKAPVVIILD NPGAREDKDG 
HEYVCGTRQT LQTALHQADL APDDIYITYL LKCRPLRRYN KEEARTFSKP FLIQQIKTIQ 
PQLLVCLGDT VVQAMFDDQE AHVKNLRGSW HVILGYPCIV SYHPLAVRRR PNLARQFRED 
WDMLRQRLLD C