Gene Dhaf_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1600 
Symbol 
ID7258569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1709442 
End bp1710116 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content41% 
IMG OID643561505 
Productcyclic nucleotide-binding protein 
Protein accessionYP_002458085 
Protein GI219667650 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAA TTATGAAACA GTTTTTAAAA GGAAACGATT TATCGCTCAG CATCCAAGAA 
ATATTTAAAA ATGAACTTAT ACCCTGCACG GTAAGGCATT TGCCAAAGGG TGAAATCCTT
TGGCATGACA AAGAGCCCCA CCCTTACAGT TATTTTATTA TCAATGGCAT CATCAAACTT
CACGTGGTTA CGAAAGAAGG CCGGGAAAAA GCCTTGTTTT ACTATACGAA CGGCTCTCTT
TTAGGATTTC AGAATTTAGC TAAAGAAAAA AGGACGATTA CCACGGCCAC GGCCATTTTA
CCAACTTCAC TTTACGCTTG TGAGTTCTCC CTGCTCTACA CCTTTGTTAT GAACAACCCT
CAATATTTTG CTGCTTTCAC AAGTTACATT TTTCACCATA TGGCGGTGGA AGCAGAAGAA
ATCGTCAATA TATCCTTATA CAATACGGCG GAACGACTGG CTGCCCTTCT CGTTCTTCTG
GCGGAAGAAT TTCCTCAGAA TGAGCAGGGC TATATTGAGA TTCCTTTTAA TAACGAGGAA
CTGGCGACGA TGGTCGGTGC TTGCCGTAAC AGCGTCTTTA ATGCTTTATC CGTATTTCAA
AAGCAGAAGC TGATTCATAA GGGCAGAGGA AGATTGGTTA TTGCTGATTT ACCCCGCTTA
AAGGAGTACG TATAA
 
Protein sequence
MAKIMKQFLK GNDLSLSIQE IFKNELIPCT VRHLPKGEIL WHDKEPHPYS YFIINGIIKL 
HVVTKEGREK ALFYYTNGSL LGFQNLAKEK RTITTATAIL PTSLYACEFS LLYTFVMNNP
QYFAAFTSYI FHHMAVEAEE IVNISLYNTA ERLAALLVLL AEEFPQNEQG YIEIPFNNEE
LATMVGACRN SVFNALSVFQ KQKLIHKGRG RLVIADLPRL KEYV