Gene Dhaf_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1543 
Symbol 
ID7258512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1647182 
End bp1647970 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content51% 
IMG OID643561449 
ProductABC transporter related 
Protein accessionYP_002458029 
Protein GI219667594 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGTG TTAAAAGCTT AAGTTTCCAC TACCAACCGG AACGAATCAT CCTCAAAGAT 
ATTTCCTTTG ATCTGGACAG CCATGAGATT CTTTGCCTGC TGGGGCCCAA CGGGACCGGT
AAAACCACTC TGCTCAGATG CATCCTTTCC CTCAATAAAA TGAAAAGCGG CCGGATTACC
CTGAATGGTT TGGAGTTAAG CAAAATTTCC CCCAAAAGGC GGGCGGAGAT GATGGCTTAT
GTCCCTCAGG CTACCACGGT GGCTTTCCCT TACGAAGCCG CGGAGATCGT ACAGATGGGG
CGGGTCGTCA ATCTGTCCCT GGGAGCCCGG CCCTCGGCAC GGGATCGGAA GCTGGCTGAA
GAAGCCATGG AGAAGATGGG AATTCTGCAC ATGAGCAGCT ATCCCTTTAA TGAGATGAGC
GGCGGAGAAA AGCAGATGGT GCTGATCGCC AGAGCCATTG CCCAACAGGC CAAAATTCTG
GTCATGGATG AGCCTACCGC CAATCTGGAT TATTATAACC AAGTAAAAAT GCTCAAGGTG
ATCAAAGCCT TGGCTGAGCA GGGGTACGCC ATCTTAATGA CGTCCCATTT TCCGGATCAC
GCCTTTCTGG CCTGCAGCAA AGCGGTGCTC ATGCGGGACG GCGTGATCAT GGCCCAAGGA
CACCCTGATG AGGTCGTAAC CACCGAGAAT CTGACCAGGC TTTATTCTAC CCCTGTCTGT
GTAGCTGAAG CCAGATTGGA TGCTATGGAT ACCGCTATGA AAGTGTGTAT CCCGGTTATG
AATAATTAA
 
Protein sequence
MLSVKSLSFH YQPERIILKD ISFDLDSHEI LCLLGPNGTG KTTLLRCILS LNKMKSGRIT 
LNGLELSKIS PKRRAEMMAY VPQATTVAFP YEAAEIVQMG RVVNLSLGAR PSARDRKLAE
EAMEKMGILH MSSYPFNEMS GGEKQMVLIA RAIAQQAKIL VMDEPTANLD YYNQVKMLKV
IKALAEQGYA ILMTSHFPDH AFLACSKAVL MRDGVIMAQG HPDEVVTTEN LTRLYSTPVC
VAEARLDAMD TAMKVCIPVM NN