Gene Dhaf_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1275 
Symbol 
ID7258245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1372191 
End bp1372790 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content52% 
IMG OID643561188 
ProductABC transporter related 
Protein accessionYP_002457768 
Protein GI219667333 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTTG AGGGAAAAAA TATTTGCTTC CGCTATGGCC AACCTTGGCT TCTTCAGGAT 
ATCAATCTTC AGCTTGAAGA AGGGGAGAGG GTGGGACTGA TTGGGCCTTC CGGGTGTGGC
AAAAGCACCC TGGCCAAAAT CCTCTCCGGT TATCTTAAAC CAATCCGGGG AGAGGTATTG
CTGGCCGGCA AGCCTTTACC AGAAAAGGGC TATTGTCCGG TTCAACTCAT CTATCAGCAC
CCTGAAAAAG CCCTCAATCC CCGCTGGAAG CTGGGAGCCT CCCTGGCGGA GGGGTGGGAG
CCTGATGACC AAACCCTTGA GGAACTGGGG ATTGAGAAGG AATGGCTGAA ACGCTATCCC
AACGAGCTTT CAGGAGGAGA ATTGCAGCGC TTCTGTATCG CCCGGGTGCT GGGCCACCCG
ACCCGCTTTA TCCTCGCCGA TGAAATAAGC ACCATGCTGG ATGTGATCAC CCAGGCTCAG
ATTTGGGATG TGTTGCTGAA GATCATCAAA GAGCGCAATA TGGGGTTGTT GACCGTCACC
CATAACCGCG CTCTTGCTGA AAAGATTTGT ACACGTCTTA TTCATTTTGA AGATCTCTGA
 
Protein sequence
MLLEGKNICF RYGQPWLLQD INLQLEEGER VGLIGPSGCG KSTLAKILSG YLKPIRGEVL 
LAGKPLPEKG YCPVQLIYQH PEKALNPRWK LGASLAEGWE PDDQTLEELG IEKEWLKRYP
NELSGGELQR FCIARVLGHP TRFILADEIS TMLDVITQAQ IWDVLLKIIK ERNMGLLTVT
HNRALAEKIC TRLIHFEDL