Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1275 |
Symbol | |
ID | 7258245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1372191 |
End bp | 1372790 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643561188 |
Product | ABC transporter related |
Protein accession | YP_002457768 |
Protein GI | 219667333 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCTTG AGGGAAAAAA TATTTGCTTC CGCTATGGCC AACCTTGGCT TCTTCAGGAT ATCAATCTTC AGCTTGAAGA AGGGGAGAGG GTGGGACTGA TTGGGCCTTC CGGGTGTGGC AAAAGCACCC TGGCCAAAAT CCTCTCCGGT TATCTTAAAC CAATCCGGGG AGAGGTATTG CTGGCCGGCA AGCCTTTACC AGAAAAGGGC TATTGTCCGG TTCAACTCAT CTATCAGCAC CCTGAAAAAG CCCTCAATCC CCGCTGGAAG CTGGGAGCCT CCCTGGCGGA GGGGTGGGAG CCTGATGACC AAACCCTTGA GGAACTGGGG ATTGAGAAGG AATGGCTGAA ACGCTATCCC AACGAGCTTT CAGGAGGAGA ATTGCAGCGC TTCTGTATCG CCCGGGTGCT GGGCCACCCG ACCCGCTTTA TCCTCGCCGA TGAAATAAGC ACCATGCTGG ATGTGATCAC CCAGGCTCAG ATTTGGGATG TGTTGCTGAA GATCATCAAA GAGCGCAATA TGGGGTTGTT GACCGTCACC CATAACCGCG CTCTTGCTGA AAAGATTTGT ACACGTCTTA TTCATTTTGA AGATCTCTGA
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Protein sequence | MLLEGKNICF RYGQPWLLQD INLQLEEGER VGLIGPSGCG KSTLAKILSG YLKPIRGEVL LAGKPLPEKG YCPVQLIYQH PEKALNPRWK LGASLAEGWE PDDQTLEELG IEKEWLKRYP NELSGGELQR FCIARVLGHP TRFILADEIS TMLDVITQAQ IWDVLLKIIK ERNMGLLTVT HNRALAEKIC TRLIHFEDL
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