Gene Dhaf_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1180 
Symbol 
ID7258150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1277176 
End bp1277637 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content51% 
IMG OID643561094 
ProductEndoribonuclease L-PSP 
Protein accessionYP_002457674 
Protein GI219667239 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAGA TTGAAGAGAC TTTGCTGCTA AGGTATGGCT TGGAATTACC CGCTCCTTCG 
GAACCGGATG GGTATTATGC ACGAGTCATT CCCACGGGAA ATTTGCTTTA TGTCTGCGGT
CATACCCCGA AACGCCAAGG GGAGTATGTG TTCCTGGGCA AAGTCGGCGA GGATTTTTCC
GTTGAGCAGG GGCAGGAAGC AGCCAGAATT GCCATGACCA ATTGTTTGGC AGCTTTGAAG
GAGCATCTGG GGGATTTGAG CTTGATTAAG CAATTTGTTC AGGTCATCGG TTATGTGCGC
AGTGCGGAAC ATTTTACCCA GCAGCCTTTA GTGATGAATG GGGCGTCTGA ACTTCTGCTC
ACCTGTTTTG GGGAGAGAGG ACGACACACC CGCATGGCTT TGGGCACCAA CCAACTCCCC
GGTGGAGCCG CAGTGGAAAT TATGTGCGTG GTTGAAGTAT AG
 
Protein sequence
MLEIEETLLL RYGLELPAPS EPDGYYARVI PTGNLLYVCG HTPKRQGEYV FLGKVGEDFS 
VEQGQEAARI AMTNCLAALK EHLGDLSLIK QFVQVIGYVR SAEHFTQQPL VMNGASELLL
TCFGERGRHT RMALGTNQLP GGAAVEIMCV VEV