| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1148 |
|---|
| Symbol | |
|---|
| ID | 7258118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1241924 |
|---|
| End bp | 1242835 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643561063 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002457643 |
|---|
| Protein GI | 219667208 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000000219344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAATAG AAACCTTAGA AATTTTCAGG AAAGTAGCAG AAGAAAAAAG CTTTTCCAAA
GCAGCCGAAG ATCTCTTCCT TTCCCAACCG GCTGTCAGCT CACACATTCG CAATTTAGAG
AATGAGTTTG GAACAAAGCT CATTTATCGT TCCTCAAAGC ATGTTGATTT GACTCCGGCT
GGAGAAATCC TCTATGAGCA GGCCTGCAGA ATCATCAATC AATACCAGGA GGCCAAAGAA
AAAATCAACC AGATTCAAAG CATTGTTTCC GGAAATCTCC GCATTGGGGC GAGCTTTACG
ATCGGGGAAT ATATTCTGCC GGAATTGGTC AGTCAAACGG CCAGAAGGTA TCCCAATCTC
AATATTAATG TCACCATCGG GAATACGGAA GAGATTGCTC AAGGATTAAG GCAGAACCGG
TTGGATGTAG CTTTAGTCGA GGGTAAGATC ACCGGTAAGG AGTTTATCCT GGAGCCTTTC
ATGGTGGATG AAATGGTTTT GATTGCTCTG CCAAGTCACC CCTTGGCAAA AATAAAAGGG
GTCACCGCTC AGGATCTTGA GGATCAGGTT TGGATTCTAC GGGAAACGGG TTCCGGAACC
CGTGAGTTCA GTGATCGCTT TATCGAAACA CTGAAGATTC CGGTCAAGCA TTCTTATGGA
TTCAGCAGCA ACACTGGGGT TAAGGCAGCG GTTCTGAGCG GACTGGGAAT CGCTTTAGTA
TCAAAGCTGA TTATTCAAAA AGAGATTAAG GCGGGAGAAA TAGCCATTAT ACCCCTGGAA
GAAAACTTGC CCCGCCTGTC ACGGGAGTTC CTTATTGCGA GAGGCCAGCA AACTTATTTT
ACGAAAGCCT CGGAGGCTTT TCTGATGGAA TTAAGCCATT ACAGCCAGGA TACTCATGAG
AATGGTCTTT AG
|
|---|
| Protein sequence | MIIETLEIFR KVAEEKSFSK AAEDLFLSQP AVSSHIRNLE NEFGTKLIYR SSKHVDLTPA
GEILYEQACR IINQYQEAKE KINQIQSIVS GNLRIGASFT IGEYILPELV SQTARRYPNL
NINVTIGNTE EIAQGLRQNR LDVALVEGKI TGKEFILEPF MVDEMVLIAL PSHPLAKIKG
VTAQDLEDQV WILRETGSGT REFSDRFIET LKIPVKHSYG FSSNTGVKAA VLSGLGIALV
SKLIIQKEIK AGEIAIIPLE ENLPRLSREF LIARGQQTYF TKASEAFLME LSHYSQDTHE
NGL
|
|---|
| |