Gene Dhaf_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1110 
Symbol 
ID7258079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1201386 
End bp1202402 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content47% 
IMG OID643561025 
Producthypothetical protein 
Protein accessionYP_002457606 
Protein GI219667171 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTA CAAAAAGAGA AAATTATCTT ATGGCAATGA ACCATGAAAA GCCCCTTTGG 
ACGCCCGTTT TTTTGTATGA CAACGCTGCC GTCGGTTTTT GTGCCGCACC TGGCCCCTGG
TTTGAGAAAG GTCCGGTCGG CGGTGGCTAC GACGGATTCG GGGTGCGCTG GATTACTCCC
GAATCGGGGA GCGGCACACC AATTCCCGCT CCCAATGAAT ATATTCTTAC TTCGGAAACG
GTTCAGGACT GGAAAAAACT TGTCAAGTTC CCCAATGTCA ATGATTTCGA CTGGGAAGAT
TATGCTAAGG CCGAATTGAC ACCTTACAAC AGGAACGAAG TGACGATCGA TTTCGGCAGC
GGAAATGGTC CCTTCGAGCG TCTGGCTGCT CTGATGGGTT TCGAAGAAGC ACTCATTGCA
CTTCTCGAAG AACCTGAAGC CTGTGATGAA TTGATCGGAG CTATTGTTGA CTATAAGATC
GAAGTTGCTG AAAAAGTGGC AAAATACTAC AAAGCTGATT ATTTTACAAA TTATGATGAT
ATTGCTACGG AACGAGGTTT GTTCATGTCT CCGAGCACTT TCCGTAAAAT CATCAAACCC
CATACCAAGC GCATGTACGA TGCTATAAGA TCTTTGGGCA TGCAGCCCAT ACAACACACC
TGCGGCTATG CTCAGGACGT CATCGAGGAT TTCATCGAGA TGGGCGCTCA GGCGTGGACC
TCTGTGCAGC CAACTAATGA TATTGTCGCG CTTCAGAAAA AATATGGCGA TAAAATTTCC
TTTATTGGCG GTTTTAATAC CAATGGCCGG GCGGCACAGG TGGACGCCAC CGATGAAGAA
ATTGTGAAAG AGGTCTATCG CACCCTTGAC ACCTATGGCC CGCAGGGAAG TTTCATTTTC
TTTGCCTATA AGCTTGCAAA CACGTTGGAT ATGAACAAGT TTATGGCTGA ATGCATGCGA
GCTATTGGCC CAGCAATCGC TCGTTCAATG GAGAATGCCG GGCTTAGCCA AGTTTAA
 
Protein sequence
MTITKRENYL MAMNHEKPLW TPVFLYDNAA VGFCAAPGPW FEKGPVGGGY DGFGVRWITP 
ESGSGTPIPA PNEYILTSET VQDWKKLVKF PNVNDFDWED YAKAELTPYN RNEVTIDFGS
GNGPFERLAA LMGFEEALIA LLEEPEACDE LIGAIVDYKI EVAEKVAKYY KADYFTNYDD
IATERGLFMS PSTFRKIIKP HTKRMYDAIR SLGMQPIQHT CGYAQDVIED FIEMGAQAWT
SVQPTNDIVA LQKKYGDKIS FIGGFNTNGR AAQVDATDEE IVKEVYRTLD TYGPQGSFIF
FAYKLANTLD MNKFMAECMR AIGPAIARSM ENAGLSQV