Gene Dhaf_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1091 
Symbol 
ID7258060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1184243 
End bp1184752 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content50% 
IMG OID643561006 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002457587 
Protein GI219667152 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000930637 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATCCA AAATTGGCCC CCCGGCCTCC ACTATGGAGA CCTGGTATCA AGAAACCGTA 
ACCAAGCTGT ATCGCTTTAT TTACTCCCAA CTACAAAATA AAGAAGAAAC AGAAGACATT
ACTCAGGAAA CCTACTTACG CTGTCTTAAG CAAGCTCCGG ACGCTCTCCC GCCTTATCCC
TATCTCAAGC AGATTGCCCG CAATCTGATG ACCGATCGCT ACCGCCACAA ATTAGTAGCC
CAAAGCCATC TTGAACATCT CCCGGAGCCT GAGCATCCTT CCCCTGAAGA AGAGTGGCTG
ACCCGAGCCA CCCTTCAGGA ACTGATGAAT CAGCTTCCCT CAGATTATCG TCAGATTTTG
GAGTACCGCA TTATTCAGGG CTATTCCCGC AAGGAAACCG CCACCCTGAT GGGACGCAGT
GAAAGCTCCA TTCGCGGGCT GCAGTATAGA GCTTTACAGA CCCTACGCTC CTACATCCAC
CTTTATCAAC AGAAAGGAGG GGACTTGTGA
 
Protein sequence
MESKIGPPAS TMETWYQETV TKLYRFIYSQ LQNKEETEDI TQETYLRCLK QAPDALPPYP 
YLKQIARNLM TDRYRHKLVA QSHLEHLPEP EHPSPEEEWL TRATLQELMN QLPSDYRQIL
EYRIIQGYSR KETATLMGRS ESSIRGLQYR ALQTLRSYIH LYQQKGGDL