Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1091 |
Symbol | |
ID | 7258060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 1184243 |
End bp | 1184752 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643561006 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002457587 |
Protein GI | 219667152 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0000930637 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAATCCA AAATTGGCCC CCCGGCCTCC ACTATGGAGA CCTGGTATCA AGAAACCGTA ACCAAGCTGT ATCGCTTTAT TTACTCCCAA CTACAAAATA AAGAAGAAAC AGAAGACATT ACTCAGGAAA CCTACTTACG CTGTCTTAAG CAAGCTCCGG ACGCTCTCCC GCCTTATCCC TATCTCAAGC AGATTGCCCG CAATCTGATG ACCGATCGCT ACCGCCACAA ATTAGTAGCC CAAAGCCATC TTGAACATCT CCCGGAGCCT GAGCATCCTT CCCCTGAAGA AGAGTGGCTG ACCCGAGCCA CCCTTCAGGA ACTGATGAAT CAGCTTCCCT CAGATTATCG TCAGATTTTG GAGTACCGCA TTATTCAGGG CTATTCCCGC AAGGAAACCG CCACCCTGAT GGGACGCAGT GAAAGCTCCA TTCGCGGGCT GCAGTATAGA GCTTTACAGA CCCTACGCTC CTACATCCAC CTTTATCAAC AGAAAGGAGG GGACTTGTGA
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Protein sequence | MESKIGPPAS TMETWYQETV TKLYRFIYSQ LQNKEETEDI TQETYLRCLK QAPDALPPYP YLKQIARNLM TDRYRHKLVA QSHLEHLPEP EHPSPEEEWL TRATLQELMN QLPSDYRQIL EYRIIQGYSR KETATLMGRS ESSIRGLQYR ALQTLRSYIH LYQQKGGDL
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