| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1083 |
|---|
| Symbol | |
|---|
| ID | 7258052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1176124 |
|---|
| End bp | 1176888 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643560998 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_002457579 |
|---|
| Protein GI | 219667144 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0124198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACA CAGTGCAGAA ATTGGCTCAT TTAGCAGGAG TCAGCTCACG AACCCTCAGA
TACTATGATG AGATCGGGAT TCTTAAGCCG GCCAGAATCT CTTCTTCAGG GTATCGGATC
TATGGACAAC AAGAAGTTGA CCGCTTGCAG CAAATATTAT TCTATAGGGA GTTGGGGATG
AGCTTGGAGG GTATTAAAGA TATGGTAACC TCTCCTGATT TTGATGGAGC AAAGGCACTG
CGGGAACATC GTGAGAAGCT TCTGGAAAAA AGAGAGCAAT TGGAGCAGCT CATTGCCAAT
GTTGAAAAAA CCATTGCTCA AAAAGAAGGG AGAATCACTA TGTCCGACAA AGAAAAGTTT
GAAGGATTTA AACGTAAGAT GATTGAGGAG AATGAAGCCA AATACGGTGA GGAAATCCGG
GAAAAGTATG GTGAAGAGAC TGTAGAGGAA TCCAACCGGA AGCTTATGAA CATGACCCAG
GAACAGTACG CTGAGTTCAC TAAGCTTGGA GAAGAGGTGT TGGTCACCCT TTGTGAGGCC
TTCAAAACCG GAGATCCTGC CGGGGAGCTG GCTCAAAAAA CGGCCGATCT CCATCGCCAA
TGGCTCACCT ACTCCTGGCC CAGCTACTCT AAGGAGGCTC ATGCCGGACT GGCTCAGATG
TATGTGGATG ATCCGAGATT TACGGCCTAT TATGATGAAA AGCAGCCGGG AGCCGCGGAA
TTCCTTAGGG ATGCAGTCTT CATCTATACT GGGATGAAGA AGTAA
|
|---|
| Protein sequence | MEYTVQKLAH LAGVSSRTLR YYDEIGILKP ARISSSGYRI YGQQEVDRLQ QILFYRELGM
SLEGIKDMVT SPDFDGAKAL REHREKLLEK REQLEQLIAN VEKTIAQKEG RITMSDKEKF
EGFKRKMIEE NEAKYGEEIR EKYGEETVEE SNRKLMNMTQ EQYAEFTKLG EEVLVTLCEA
FKTGDPAGEL AQKTADLHRQ WLTYSWPSYS KEAHAGLAQM YVDDPRFTAY YDEKQPGAAE
FLRDAVFIYT GMKK
|
|---|
| |