| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0993 |
|---|
| Symbol | |
|---|
| ID | 7257961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 1078757 |
|---|
| End bp | 1080610 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643560907 |
|---|
| Product | asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_002457489 |
|---|
| Protein GI | 219667054 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000224185 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCTCCA TTCTTGGATT AGTAAATTTT AAACGGAAGA TTTCTCCCCA GGAGATACAA
TGCCTTAGCA CTATGGGGAA GACTTTAATT CATCGGGGTC CGGACCAAAA CGGCCTTGAA
TACGGAGAAC ATTTTGCTTT TCAACATAAC CGTTTAGCCA TTATCGATAT TGAAAAAGGC
CGGCAGCCCA TGACCGCCAC CCATCAGGGA TACGACTATA CCATTGTTTA CAACGGCGAA
CTTTACAACA CCGCAGATTT ACGGCAAGAG CTCCTTGAGC ACGGAGTTAA GTTCAAAACT
TACTGTGATA CGGAAGTAGT GCTCTATGCC TATATCATCT GGGGAGAACA ATGCTCCAGC
AAATTAAACG GCATTTACGC CTTTGTAATC TACGATTCTA AAGAAAAAAA GACCTATCTT
TCCCGTGACC GCTTCGGCGT CAAACCCTTC TTCTACACTT TTGTAGAGGG CGCTCTTCTT
TTCGCTTCGG AGATCAAAGC CCTCCTCAAG CACCCTCAAG TGAAACCCCG TCTGGATTAC
CAGGGTTTAT GGCAGCTCCT CTATATGATG CCTGTCAAAG AGGAAGGCAC CGCCATCTTT
AAGGATATCT TCGAATTGCC CACCGCCTCC CATGCTTTCT ATAGCCTTGC CCCAGGAGCA
TCTGAAGCAG AGTTGAAGAT CGCCAAATAC TGGACCATGG AGGCTTATGA GAATCAGGAC
AGCGAAGCTG CTATCGTCGC CACCACCCGG GATCTGTTGG TGGATGCCAT TGAACGTCAG
CTGGTCTCCG ATGTCCCTCT TTGCACTTTC CTTTCCGGAG GATTGGATTC TTCAATCATC
ACCGCCGTGG CAGCGCAAAA ATATCAAGCC GAAGGACGGC AGCTTGCTAC CTATTCCTTT
GAACATGAAG GCAATAAAGA CCATTTTAAG CAGACTCTTT TCCAACCGCA AAGTGATGAC
GAGTTTGCCG TTTATCTGGC TCAGCACCTG CACACACAGC ATCAGATTCT GACCGCTAAA
AAGGAGCATT TGGTGGACTA CCTGGATGAA GCCGTAAGGT ATAGGGACTA TCCCGGCATG
GCAGATATCG ATTCCTCCCT GCTCTTTTAT TGCCGTCAGG TAAAAGAACA CCACACGGTG
GCTTTATCCG GAGAATGCTC TGATGAAGTC TTCGGGGGCT ACCCCTGGTT TTATCGTCCG
GAAATGCTCA CACGGGGGTT TTTCCCTTGG ATCCACGAAC CCCATGCCCG GATTAGTCTG
TTCAAGCCTG AACTGGTTCG CCCCCAGGAG GGCTTTGCGT ACACTTCGGA GATTTACCGC
CGGAGCGTCG AGGCCTGCCC CTTGCTTCCA GATGAGTCGG AGACTATGCA GAACTCCCGC
ATCGCCAGCT GGCTTTCCAT TAATTACTTT ATGACCTCCT TGCTGGAACG CAAAGATCGC
ATGAGCATGG CTTCGGGCTT GGAAGTCCGG GTTCCTTTCT CCGATCACCG CTTGGTTCAG
TACGTCTATA ATGTGCCATG GGAGATTAAA TTCAAGGATG GCGTCGAAAA GGCACTGCTT
CGGGCCGCCA TGCAGGACTA TCTGCCTCCT AAAATCCTCT ATCGTAAAAA AAGCCCCTTC
CCTAAAACCC ATGATCCTCA TTATGAAGAG CTGGTATTCC ATCTTTTCCG GAAGCGGCTG
GACTCCGGCA GCGGCATGCT GGCAGAGCTA TTGCAAAAGG ATGTGCTCAA TCGCCTTATA
AGTCCTGGAA ATAACACCTG GTTTGGCCAG TTGATGGGGC TTCCGCAATT GCTGGCTTGG
CTGGTGCAGC TGGACTATTG GTTTGAAGCC TACCAGGTGC AATTGGTAGG CTAA
|
|---|
| Protein sequence | MCSILGLVNF KRKISPQEIQ CLSTMGKTLI HRGPDQNGLE YGEHFAFQHN RLAIIDIEKG
RQPMTATHQG YDYTIVYNGE LYNTADLRQE LLEHGVKFKT YCDTEVVLYA YIIWGEQCSS
KLNGIYAFVI YDSKEKKTYL SRDRFGVKPF FYTFVEGALL FASEIKALLK HPQVKPRLDY
QGLWQLLYMM PVKEEGTAIF KDIFELPTAS HAFYSLAPGA SEAELKIAKY WTMEAYENQD
SEAAIVATTR DLLVDAIERQ LVSDVPLCTF LSGGLDSSII TAVAAQKYQA EGRQLATYSF
EHEGNKDHFK QTLFQPQSDD EFAVYLAQHL HTQHQILTAK KEHLVDYLDE AVRYRDYPGM
ADIDSSLLFY CRQVKEHHTV ALSGECSDEV FGGYPWFYRP EMLTRGFFPW IHEPHARISL
FKPELVRPQE GFAYTSEIYR RSVEACPLLP DESETMQNSR IASWLSINYF MTSLLERKDR
MSMASGLEVR VPFSDHRLVQ YVYNVPWEIK FKDGVEKALL RAAMQDYLPP KILYRKKSPF
PKTHDPHYEE LVFHLFRKRL DSGSGMLAEL LQKDVLNRLI SPGNNTWFGQ LMGLPQLLAW
LVQLDYWFEA YQVQLVG
|
|---|
| |