Gene Dhaf_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0902 
Symbol 
ID7257871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp993104 
End bp994339 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content48% 
IMG OID643560819 
ProductMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) 
Protein accessionYP_002457401 
Protein GI219666966 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAA GGGAGAATGC CCTAAAACTT CATGCTGATC ATCGCGGTAA AATCAAGATT 
GCGCTTAAAG TTCCCTGCCG TGATTATAAT GATTTGAGTT TAGCCTATTC ACCGGGGGTA
GCTGAACCTT GTATGGAGAT TGCCCAAGAT CCTGAATTGG TGAATACCTA CACGAACCGG
GCTAATTGTG TGGCAGTCGT GTCCAATGGG ACAGCAGTCC TTGGTCTTGG CGATATAGGT
GCACGTGCAG CCATGCCTGT TATGGAAGGG AAATCCCTTT TGTTCAAAAA TTTTGCTGGG
GTAGACTCTT TCCCCATTTG CTTAGATACA AAGAATATTG ACAAGATTGT TGAAGTGGTC
AAATTACTGG AGCCTACCTT TGGAGGGATC AATCTGGAGG ATATTAAAGC TCCTGAGTGC
TTTGAGATTG AGGAAAAGCT GAAAGCAGTC TATGATGGCC CGGTATTCCA TGATGATCAG
CATGGTACAG CTGTTGTGAC CCTGGCCGCG ATGTTTAATG CCTTGAAAAT AGTCAACAAG
GAGCTGAAAG ATGTCAAGAT CGTAACCAGC GGAGCCGGTG CAGCCGGCAT GGCTATTGTT
AAGCTGCTGA TGGATTGCGG TCTTCAAAAT GTCATCATGT GTGATACCAA GGGGACGATT
TATAAGGGTC GTGCCGAAGG GATGAATAAG TATAAAGAGG AAATCGCTTT AAGGACCAAT
CCCGCCATGG TTAAAGGCAG CCTTGGGGAA GCTTTGAAAG GCGCCGACGT ATTTATCGGC
ATCTCTGTAG GCAATACGGT GACTCAGGAA ATGATTCGCA CCATGGCCAA AGATGCGATT
GTCTTTGCTC AGGCTAATCC GGTTCCTGAA ATCATGCCTG AAGAAGCAAA AGAGGCGGGG
GCAGCTGTAA TAGGAACAGG CCGTTCCGAC TACCCCAACC AAATTAACAA TATTCTCTCT
TTCCCCGGAA TTTTCCGTGG GACCTTTGAT GTTGAAGCGA GAGAAATCAA TGGGCCAATG
AAAATTGCCG CTGCGGAAGC AATTGCTTCC ATTGTCAGCC CTGAGGAGCT CAGTGCAGAG
TATATCATTC CGAAAGCCTT CGACAAGCGG GTGGCACCTG CTGTAGCCGC AGCTGTAGCC
AAAGCGGCCA TGGAGAGCGG TGTGGCAAAA AGGAAGGTCG ATCCAGAGCA GGTTGCTCTG
AATTTAACCA GCTTACTTGC CCAAGAGGGC AAATAA
 
Protein sequence
MSLRENALKL HADHRGKIKI ALKVPCRDYN DLSLAYSPGV AEPCMEIAQD PELVNTYTNR 
ANCVAVVSNG TAVLGLGDIG ARAAMPVMEG KSLLFKNFAG VDSFPICLDT KNIDKIVEVV
KLLEPTFGGI NLEDIKAPEC FEIEEKLKAV YDGPVFHDDQ HGTAVVTLAA MFNALKIVNK
ELKDVKIVTS GAGAAGMAIV KLLMDCGLQN VIMCDTKGTI YKGRAEGMNK YKEEIALRTN
PAMVKGSLGE ALKGADVFIG ISVGNTVTQE MIRTMAKDAI VFAQANPVPE IMPEEAKEAG
AAVIGTGRSD YPNQINNILS FPGIFRGTFD VEAREINGPM KIAAAEAIAS IVSPEELSAE
YIIPKAFDKR VAPAVAAAVA KAAMESGVAK RKVDPEQVAL NLTSLLAQEG K