| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0806 |
|---|
| Symbol | |
|---|
| ID | 7257773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 894895 |
|---|
| End bp | 896022 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643560721 |
|---|
| Product | hydrogenase (NiFe) small subunit HydA |
|---|
| Protein accession | YP_002457305 |
|---|
| Protein GI | 219666870 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTAATC GTCGAGAATT TCTTAAGCTG GTGGTCAAAG GCGCAATTCT GGGCAACTTC
ATCAGCTTAG TAACCCCCGA ACTGGAAAAA GCCCTCGCAC AAGGAGAAAT CAATAAACTT
CCCATTATTA TGGTGGAGAC AGGAACCTGT ACCGGTGACA GCATTTCTTT GGATAATATC
TGGTCACCCA CTCTATCCGA TATATTTACC AACATTACTG AATGGCGTTA TGACTGGACC
ATGATGCAAT CACAAGGGGA GCTGGCCTAC GACGTCTTGT TGGAGATCGA AAAAAATCAA
GCTCATGAGT TTGTTCTTCT TGTTCAAGGT TCTATGATTC GCCGGGACGG AGGTCATTAT
AATTACGCCG GATTGGAAAA CGGTCAACTG ATCACCGGTC TGGATCTGGT GCGCAGACTG
GGGTTAAAAG CCAAATACGT AGTGGCTGTT GGCCATTGCG CTACCTATGG GGGACCCGTC
GCCGGTTACC CTAATCCTAC ACAGTCTACC GGTGTACAAA ATATTTTGCC CGAGCGCCGG
GTGATCAATG TCTCCGGCTG CCCCGCCCAT CCGGATTGGA TCATGGGAAC TCTCCTTCAC
TTAGCTCTTT ATGGTGAGCC TGAATTGGAG AAATTCGGCC GGCCGAAAAT GTTTTTTGGG
GAGACTATTC ATAATAATTG TCCCCGTCGC CGCTACTACG ACCAGGGCAT ATTTGCCACA
GATATCGGTC AGAAAGAATG CCTTTACCGG GTAGGCTGTA AAGGACCGGT CACCTATGCG
GATTGTCCGA TCCGTCGCTG GAACGATCAT TATAATTGGC CTATAGGGTG CAATTCCCCC
TGTATCGGCT GTACCGAGCC CGGTTATCCT GACCTTATGG AACCCTTTAC CGCCCATTTT
CCCGATATCC CTTTTCCAGG AGGAAGCCGG GCGGCAACGG ATCGAATCGG CAGGGGGGTC
TTGGGATTAG CCACTCTAGG AATCGGTGGT TATTTTTTAT CTTCCTTTTA CAAGGGCCGC
CTTCATCGCA ATTTCATCAG GTCCACCATC AAAGAAAAGA AGAAAAAGAT TAAGGTAAAA
AAGGTTAAAT TCTGTCATCA ATATCGCCCG AAGAAACCAA AGGAGTGA
|
|---|
| Protein sequence | MLNRREFLKL VVKGAILGNF ISLVTPELEK ALAQGEINKL PIIMVETGTC TGDSISLDNI
WSPTLSDIFT NITEWRYDWT MMQSQGELAY DVLLEIEKNQ AHEFVLLVQG SMIRRDGGHY
NYAGLENGQL ITGLDLVRRL GLKAKYVVAV GHCATYGGPV AGYPNPTQST GVQNILPERR
VINVSGCPAH PDWIMGTLLH LALYGEPELE KFGRPKMFFG ETIHNNCPRR RYYDQGIFAT
DIGQKECLYR VGCKGPVTYA DCPIRRWNDH YNWPIGCNSP CIGCTEPGYP DLMEPFTAHF
PDIPFPGGSR AATDRIGRGV LGLATLGIGG YFLSSFYKGR LHRNFIRSTI KEKKKKIKVK
KVKFCHQYRP KKPKE
|
|---|
| |