Gene Dhaf_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0616 
Symbol 
ID7257583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp675153 
End bp676061 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content46% 
IMG OID643560534 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002457118 
Protein GI219666683 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATCG AATACCTGCA CTATTTTATC GAGGTGGCCC GCTGCCGGTC GATCAACAAA 
GCCAGCAAAA ATCTCCGCCT GACCCAAGCC AATCTGAGCA AGATGATGGC AGCTCTGGAA
CGTCATTTCG CAACCCCGCT GTTTGAACGC TCCAACCGGG GCATTACTTT GACCGAACAC
GGGAAACGGG TGCTGGAATG GTCTCAAAAA GTGATGGCTG AGCAAACCCA GCTGATCCAG
GCTTTTGCTG AAGATAAGAC CCATCAAAAC AGGCAGGGAA AGTTAACCAT TCTCTGTCCG
GCCAATATTG CCGGAGACAG CAATGCCAAT GTGATCAATA AATTCACCGG CGAATATCCC
AACCTCAAGA TCAGTTATCA GGAAATGGGC GTGCCGGAAA TTATCAAGCA AGTCCATAAA
AACAGGGACT ATGTGGGAAT TATCATGCTG ATTGATCATT TGTATAATGA GTTGATTACA
GAGGAACTGT GCTACTATCC CATGCGAGAC ATCAAATTTG TGGTCTACTC CCATAAGGAC
AGCCGGTTTG CCAGGCAAGG ATTTAAGAGT ATTTCCCTCA AAGCCTTAAG CAAGGAACAA
TTGATTCTTT ATAAACCCAC CAGCCTCTCT CCCTCCCCTT TTGAAGACCT GTTTGACCAG
TATGGTTTGG ACAACATCAA GTTTTCTGTC AGCAACTTAT TTACCTTCTA TGATATTTTG
CAGAAAGGCC AGTACATCAC CTTAGGCGCT GCCCGGCAAG CGAAGTTTTT CCCTAAGGTT
TTGGACGGCT TGGTGACAAC CCCGATTCGG GATAAAATCA ACTGCCGGAT CGGCATCCTG
ATTCACCGGG AAAATAAAGA CAATGCCATG ATTCAGCAAT TTATCAGATT TTACAGCGAG
TCTAAGTAA
 
Protein sequence
MRIEYLHYFI EVARCRSINK ASKNLRLTQA NLSKMMAALE RHFATPLFER SNRGITLTEH 
GKRVLEWSQK VMAEQTQLIQ AFAEDKTHQN RQGKLTILCP ANIAGDSNAN VINKFTGEYP
NLKISYQEMG VPEIIKQVHK NRDYVGIIML IDHLYNELIT EELCYYPMRD IKFVVYSHKD
SRFARQGFKS ISLKALSKEQ LILYKPTSLS PSPFEDLFDQ YGLDNIKFSV SNLFTFYDIL
QKGQYITLGA ARQAKFFPKV LDGLVTTPIR DKINCRIGIL IHRENKDNAM IQQFIRFYSE
SK