| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0571 |
|---|
| Symbol | |
|---|
| ID | 7257538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 630249 |
|---|
| End bp | 632036 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643560489 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
|---|
| Protein accession | YP_002457073 |
|---|
| Protein GI | 219666638 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGC AAAAGACAGA AAAAGAAAAT CGGATTGAGA TGTCCCGCAG ATCATTTCTG
AAAGGCAGCT TGACTGCCGG TATGCTGGCA GCCGGCGGAG CGATGCTGAC AGCCTGCTCT
CCGGCAACGA CAGGCAGTGC CGGCGCAGGC GCTGGAGATG CAGGTACAGC TGGATCAGGC
GACGGCAATG CCGGCAGCCG AATCGCACCG GGATACGCGA ATCCGGATGG CATCGGCATC
CCGCTTCAGC CCGATCGCAC CGAAGACGCT GATGTGGTGG TAATTGGTTC GGGCATGGGT
GGCTTCGTGG CAGCCATGCT GTCTAAGGAG CTCTCCCCAG AATCCAGGGT CATCATGCTG
GAGAAGAACG GCTTCCTGGG CGGCAACACG AACTTCGCAG AAGGCGGCGG AGGTTTTGCC
AACCTCAGCC CGGCAGACGC CCGAATGAAG AGCCTTTCGG AATGCGCTGC CCGTAACTAC
GTGGTGGATC CCCAGCTTTT CTATACCATG TGCCTGGAGC AGGGTGATTG TTCCGATTGG
CTGTTTGCCA AGCACAAAGT ACCGCTGGCT TTCTATGGCA GCCCGCAGCC GCTTTATGAA
GGCGGCCATG GCGCATCGGC CATCAAAACA CTGACACCCC AGGCTGAGGC GTTGGGGGTC
GATATCCGCC TGGATTCGCG CGCTTTCGCG CTGGTGCTTG GCGATGAGTA CACGGTGACC
GGTTTGCAGT ACAAGGATGG GGACGACAAG GTTGTACAGG TCAACGCCAA GGCAGTAGTG
ATTGCCTCGG GAGGCATGAA CAACAACTCC GATCTGCTGA AACTATACGC AAATCAGGAC
GTAAACAAGA TCATACCTCT GGGCATAGGG CAAGACGGCG ATGGCCATCT GATGGTTGAG
CAGACCGCCC ATGGCAAAAG TCTGCTCCAG ACCATCGATG GCTTCTTTGC CGGTATGGGT
ACCAACAGCG AGCCGGGTGA CTTTAACTCC GATCTCAACA CAGCTGTGGG TTTCCAGTTC
AGCGATATCT TCGTCAATCA GTATGGCGTG CGCTTCTACG ATGAGTCGGT ATCATTCATC
AAGGGTTTCG GCCTCACCGC GATCTCGCAG ATCATTCTAG CTCAGGCGCA GGCCTTCTCC
ATTTTTGATG AGTCCTACCT CCGGAAGTGG GAGGCCGGGG AGTGGCAAAA TGGCAAGAAC
GGCTATGACA GCGCCACAAA GCTGCCGCGC AGCGATTATC CTTTGCAGGT CAGAGAGGAC
TTGGAAAAGT TCTCGTCCAT GAGCTGGTTT TATCAGGCCG ACAGCATCGA GGAGTTAGGC
AAGGCGATAG CTGCCGATGT CGAGACCTTC GTTGTGGAGG ATTTCGTAAA GACGGTGGAG
GCCTACAACG CGGCGGCTGC CGGAGCCGAA GACGAGTTCG GCAAGCCGGC GGAGTTTATC
TGGCCCCTTG GGACCCCTCC CTTCTATGCC GTCAAGGCCG GAGTCAACGC CTACAACACC
AACGGCGGCA TCCGTATTAA CCGCTCTGCA CAGGTCACCG ACGCCAAAGG CAAGCCAATC
TCCGGCCTCT ACGCCTCCGG CATCGCGACC GCAGGCTGGG ATTCGCAGAC TTACGGTGGC
GGAACCAATC AGCCTGTGGC CATCTGGTGC AGCTGTGCGG CGGCGCGCCA TCTGGTTGAG
AATTGTTTAG GTGGCACAGT TGACCCCAAC TGGATGGGCG ATGTTCATGT CACTGATCTT
TATGAAGAGT TTGCCAATAT AGACACCAGC GGTAATCCAC TGGGCTAA
|
|---|
| Protein sequence | MDKQKTEKEN RIEMSRRSFL KGSLTAGMLA AGGAMLTACS PATTGSAGAG AGDAGTAGSG
DGNAGSRIAP GYANPDGIGI PLQPDRTEDA DVVVIGSGMG GFVAAMLSKE LSPESRVIML
EKNGFLGGNT NFAEGGGGFA NLSPADARMK SLSECAARNY VVDPQLFYTM CLEQGDCSDW
LFAKHKVPLA FYGSPQPLYE GGHGASAIKT LTPQAEALGV DIRLDSRAFA LVLGDEYTVT
GLQYKDGDDK VVQVNAKAVV IASGGMNNNS DLLKLYANQD VNKIIPLGIG QDGDGHLMVE
QTAHGKSLLQ TIDGFFAGMG TNSEPGDFNS DLNTAVGFQF SDIFVNQYGV RFYDESVSFI
KGFGLTAISQ IILAQAQAFS IFDESYLRKW EAGEWQNGKN GYDSATKLPR SDYPLQVRED
LEKFSSMSWF YQADSIEELG KAIAADVETF VVEDFVKTVE AYNAAAAGAE DEFGKPAEFI
WPLGTPPFYA VKAGVNAYNT NGGIRINRSA QVTDAKGKPI SGLYASGIAT AGWDSQTYGG
GTNQPVAIWC SCAAARHLVE NCLGGTVDPN WMGDVHVTDL YEEFANIDTS GNPLG
|
|---|
| |