Gene Dhaf_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0339 
Symbol 
ID7257304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp374639 
End bp375592 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content51% 
IMG OID643560256 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002456842 
Protein GI219666407 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAGTA ACATCCTGAC CATTGAAAAT CTGACCAAGC GCTACGAAGA GCTCACCGCT 
GTTGATAATG TGAGTTTCTC AATTCAAGAA GGAGAATCCA TCGGCCTGGT GGGGGAGAGC
GGCTGCGGCA AGAGTACTCT GGCTCGCCTG CTGTCGGGCC TGGAAGCGCC CAGTTCAGGA
AAAGCACTCC TGAATGGCAA ACCCATTCGC ATTGAGAAAG GCCGCGGGCG GAAACACAGA
GTCAATATGG TGTTTCAGGA TCCCTCAGAT ACCTTCGCTA AGCATATGAC GGTTTTTGCC
TGCCTATACG AGGCGCTGTC CCATACCCGT AAAACATCTA AGGCAGAAGG GAAATCGATC
ATAAGGGAAA CCTTGCGCAT GGTAGAAATC CCGGAAGAAT ATATGCACCG GCGGGTACGG
CAGCTCAGCG GGGGAGAGTG TCAGCGTGTG GCCATTGCCC GGGCCCTTTT AACCGAGCCT
CATCTGCTGA TTTTCGATGA GGCAACAAGC GCCCTTGACG TTACGGTTCA GGCACAGATT
CTGCGTTTGC TGGTCAGGTT AAAGCAGGAA AAAAAGTCAA CCTATTTATT TATTTCCCAC
GATCTGGCTC TTGTCTCGTG TCTGTGCAGC AGGGTCCTTG TGATGTACCG GGGAAAATTA
GTAGAGTGCG GTACAACAGA ATGCATCATG AACTATCCCC TTCATCCCTA TACAGAGCTG
CTCATATCCT GTGCGGAAGC TTTTATGCTG GATACTTCCG GTACCAATAA AGAACTGCCG
GCCATACCAT CGGCAGAGTT GAATGCTGAA GAGAGTGGAT GCTGCTTCTT GGCGAGTTGC
GGCAGGAGAA GGCAGGTTTG CGCCGAAAAA AGACCTCAGC TCACGGAGTG CGGGCCCGGA
CATCAGGCGG CTTGCTTTTT TCCCTATATA AATAACGAGA GGATAAACAG ATGA
 
Protein sequence
MHSNILTIEN LTKRYEELTA VDNVSFSIQE GESIGLVGES GCGKSTLARL LSGLEAPSSG 
KALLNGKPIR IEKGRGRKHR VNMVFQDPSD TFAKHMTVFA CLYEALSHTR KTSKAEGKSI
IRETLRMVEI PEEYMHRRVR QLSGGECQRV AIARALLTEP HLLIFDEATS ALDVTVQAQI
LRLLVRLKQE KKSTYLFISH DLALVSCLCS RVLVMYRGKL VECGTTECIM NYPLHPYTEL
LISCAEAFML DTSGTNKELP AIPSAELNAE ESGCCFLASC GRRRQVCAEK RPQLTECGPG
HQAACFFPYI NNERINR