| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0320 |
|---|
| Symbol | |
|---|
| ID | 7257285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 358283 |
|---|
| End bp | 359692 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643560237 |
|---|
| Product | glycine cleavage T protein (aminomethyl transferase) |
|---|
| Protein accession | YP_002456823 |
|---|
| Protein GI | 219666388 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAG ACAACCAAAG AGCACAATTT CAAGTGGTTA CCGGCAATGA GAGCCCCGCC
ATTTATCATC AGTTCAGCCC GGCCCTGGAA ACAGCGACCT TGCTGTTCCA GATGGCGCCC
GGCCTTCTTG TACCTTACGA ATTTGGAGGC GTCGAATATG AAATCGATGG TTACAGAAAG
AGTGCCTGGA TTGGCACAAC ACTGATGATC AGTCCGATTT ACGACGTGGT TGGACCGGAT
GCGGTTAAGT TCTTAAACTC GATCTGTGTG AATGACTTTA CCAATTTGAC CACTAAAGGA
TTAAGGCATG CGGTCATCTG CAATGATCAA GGCCAGGTTT TAACGGATGG GGTTGTGATT
CGGATTGGTG AAGACAGATA CCGTACCTAT TGGCTGAATC CCCCGATTGA TTATTTTCTG
AAAACCAGTG GGATGAATGT GGCCGGTGAA GATCTGAGCG GCACTGAATA CTTCATCCAG
ATTGCCGGTG AAAGATCTTT GGAAATTCTG GAGGATGCTT TTGCAGCGGA TCTCCATGAT
ATCAAGTTTG CCACCCACCG CAAGGCGAGC ATGGACGGAA AAGAAGTGGA AATTATCCGT
CTCGGCATGT CGGGAAACCT TGCCTATGAA ATCCATGGCC CCATGGCTGA GTTCGACGAA
GTATACCGTA AAGTCTGGAA CAGCGGTCAG AAGTTTGGCG CCCGGAAGTT AGGAATGCAT
GCCTATAACC TGTTTAATCA TACGGAAGCC GGGTTCCCCA ATATCCATCT TCATTATCCT
CTTCCCTGGT TTGAATCAGG GGAGGATATG GCCAAGTATA TGCTGGCCAA TCCTCAATAT
TCTATGTATA ATCTCAATCG CAAGTTGGTA GGAAGCGTGG GTGAGGAACT GCAAGCCCGT
TTTGTGACTC CTTATGATGT GGGCTGGGGG TTCCTGGTCA AATTCAACCA TGAGTTCAGA
GGCCGTAAAG CCCTGGAGGA GATTGCCAAG AACCCTCCCC GTACTGCTGT AACCCTGGAA
TGGAATGGTG ATGACGTAGG CGCGGTATTT GCAACCCAGT TCAAGCCCGG CGAAGAAGCC
TGCGAAAGCA TAGGGGCTGA ATCGGAAGGG GTGTTCACAA GCAATACTTT CAGAGGCGAG
ATGGCTTATC GTGCCGACCG TGTTCTCTAC AACGGTAAAG ATATCGGCAT CAGCTCCGGC
CGAATCGTTT CTTATCACTA CAACAGCATG ATTTCTCTGG GTTTCATTGA TCCGGCCTAT
GCCAAAGGGG GTACAGAACT GACTCTGATT TGGGGTACTC CAGGGACCCG GCAGATGAAT
ATCCGCGTCA AGGTCGCCAG ATTCCCCTAT AATGGAGATT TCGTCAGAAA CGAGAATAAG
GATGTGGAGG AAATCCCTCG TCATAAATAG
|
|---|
| Protein sequence | MSSDNQRAQF QVVTGNESPA IYHQFSPALE TATLLFQMAP GLLVPYEFGG VEYEIDGYRK
SAWIGTTLMI SPIYDVVGPD AVKFLNSICV NDFTNLTTKG LRHAVICNDQ GQVLTDGVVI
RIGEDRYRTY WLNPPIDYFL KTSGMNVAGE DLSGTEYFIQ IAGERSLEIL EDAFAADLHD
IKFATHRKAS MDGKEVEIIR LGMSGNLAYE IHGPMAEFDE VYRKVWNSGQ KFGARKLGMH
AYNLFNHTEA GFPNIHLHYP LPWFESGEDM AKYMLANPQY SMYNLNRKLV GSVGEELQAR
FVTPYDVGWG FLVKFNHEFR GRKALEEIAK NPPRTAVTLE WNGDDVGAVF ATQFKPGEEA
CESIGAESEG VFTSNTFRGE MAYRADRVLY NGKDIGISSG RIVSYHYNSM ISLGFIDPAY
AKGGTELTLI WGTPGTRQMN IRVKVARFPY NGDFVRNENK DVEEIPRHK
|
|---|
| |