Gene Dhaf_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0119 
Symbol 
ID7257068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp125213 
End bp125770 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content53% 
IMG OID643560022 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_002456624 
Protein GI219666189 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000476771 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTA TCGCCGGTTT GGGCAATCCA GGCGGACAAT ATGCGGAGAC CCGGCATAAT 
GCCGGATTTC TCCTGCTGGA TTGCTTAGCT GAAGAATTAA AACTGGATTT TCGCCCCAAG 
TTCCAAGGCT TGGTGGCTGA GACAATGATG GGGGGAGAGA AGGTCTATCT GCTTAAGCCT 
CAGACCTTTA TGAATTTAAG TGGCCGTTCT ATTCGGGAGT TGGCCCAATT CTATAAGATT 
GCCCCGAAGG ATATTATGGT AGTCTACGAC GACATGGATC TGCCCATCGG CCGCCTGCGC 
CTGAGAAGCT CGGGAAGCGC CGGCGGACAC AATGGGATTA AATCCACCAT TGCCGAATTG 
GGAACGGAGG ATTTCTGGAG GCTTAAGGTG GGTATCGGCA GACCGACCGC CGGCTGGGAT 
TCTGCCCGCT ATGTTCTGGC CTCCTTTACC AAGGAGGAGC TCCCCGTTCT GGAGGAGATT 
CTGGATAAGG GGATAAAGGC GGTAACCTTG TGGGCCAAAG AGGGCGGGGA TAAAGCCATG 
AATTTGTATA ACAGGTGA
 
Protein sequence
MKLIAGLGNP GGQYAETRHN AGFLLLDCLA EELKLDFRPK FQGLVAETMM GGEKVYLLKP 
QTFMNLSGRS IRELAQFYKI APKDIMVVYD DMDLPIGRLR LRSSGSAGGH NGIKSTIAEL 
GTEDFWRLKV GIGRPTAGWD SARYVLASFT KEELPVLEEI LDKGIKAVTL WAKEGGDKAM 
NLYNR