Gene Dgeo_3108 details

Gene Information

• Locus tag: Dgeo_3108
• ID: 5687571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Deinococcus geothermalis DSM 11300
• Kingdom: Bacteria
• Replicon accession: NC_009939
• Strand: +
• Start bp: 197661
• End bp: 199493
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 641262571
• Product: N-6 DNA methylase
• Protein accession: YP_001527845
• Protein GI: 158421618
• COG category: [V] Defense mechanisms
• COG ID: [COG0286] Type I restriction-modification system methyltransferase subunit
• TIGRFAM ID: [TIGR00497] type I restriction system adenine methylase (hsdM)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAACA TGCCACCGCC GATCGACTTC CCCGCTCTTC TGCGCACGAT CCGCTCCGCG 
CTCGACCTCA CCCAGGAGCA GCTCGCGGAA CGCCTGGGTG TCTCCTTCGC CACGGTCAAC 
CGCTGGGAAG GCGGCGGCAA CAAGCCGCAG CGTGCCGCGC AGGAGACCAT CCTCGCGCTG 
GCGCGAGAGG CCGGGGTCGA GGGTGCCGAA AGCCCATCCG CCGCTGACGC TGCCGCTCAA 
GTGACCCGGC GTCGCACCGG GCGGGCGGCG GCTGCGCCCA CCACCAAGCC GATGGAGCAG 
ATGCTGTGGG ACGCCGCCTG TTCGATCCGA GGTGAGAAGG AGGCGGCCAA GTTCAAGGAT 
TACCTGCTGC CGCTGCTCTT CCTCAAGCGC CTGTCCGACG TTTTCGACGA TGAAATCGAG 
CGGCTGGCCG AGGAGTACGG CGACCGTGCC ACCGCGCTGG AGATTGCCGA GTCGGACCAC 
TCCCTGCTGC GTTTCTACCT GCCGCCCGAA GCGCGCTGGA CGGTGATCAG CGGGCGCGAG 
CCGTTCGACT GGCCGCGCGA TGTGCAAGGT CGCTCCACTG CGCCGCGCGA CATCGGCGAG 
CATTTGACCC GCGCCGTACG CGCCGTGGTC AAGCACAACC CCTCGCTCTC TGGCGTGATC 
GACGTGGTGG ACTTCGCCGC CGAAAGGAAC GGCGAGCGCG ACATCAACCC GGCCAAGCTG 
CGCGGCGTGG TGGAGACGTT TTCCGATCCG CGCTACCGGC TGGGCCTCGC CGACGTGCAG 
CCCGACTTCC TCGGTCGCGC CTACGAATAC CTGCTGCGCA AGTTCGCTGA AGGCTCCGGC 
CAGAGCGCCG GCGAGTTCTT CACCCCGACC GAAGTGGGCT TTTTGATGGC CCACATCCTG 
CGGCCCAAAC CCGGCGAGAC CTGCCACGAC TACGCCTGTG GTTCGGCGGG GCTGTTGATC 
AAGCTCCAGC TCGTCGCCCG CGAACTCGAC CCCACCAGCC GTGTGCCGCT CAAGCTCTCC 
GGCCAGGAAC TGCAGGCCGA GAGCTACGCC GTGGCGCAGA TGAACGCCAT CATCCACGAC 
ATGGAGGTGG AGCTGGCGCG TGGCGACACC ATGATCAACC CCAAGTTCCG CAATGCGGAC 
GGCTCCATCC GCCAACACGA CATCGTGGTG GCCAACCCGA TGTGGAACCA GTCCTTCGCA 
CCGGACATCT TCGCCCACGA CCCGTTCGAC CGCTTCCGCA CGGCGGGCGG CATCACCAGC 
GGAAAAGGAG ACTGGGCCTG GCTGCAACAC ACGCTGGCCT GCATGAACGA TCACGGCCGC 
GCCGCCGTCG TGCTCGATAC CGGCGCGGTG ACGCGCGGCT CCGGCTCCAA GAACGAAGAC 
AAGGAGCGCA CCATCCGCAA GTGGTTCGTC GAGCAGGACT TGATCGACGG GGTGATCCTG 
CTGCCCGAGA ACCTCTTCTA CAACACCACG GCGGCGGGCG TAATCGTGGT GCTGAACAAG 
CGCAAGCCTG CTGCGCGCAA AGGCAAGATC GTCCTGCTCA ACGCCAGCCG CCACTTCAGC 
AAGGGCAGGC CCAAAAACTA CCTGCCCGAG GAAGACCTGC GCCCACTCGC CGCGATGTAC 
CTCAAGGGGG AGCCGGTCGA CGGCGAGCTC GCTGTCATCA CCAAGCAGCA AGCGGAAGAA 
GCGGACTACA ACCTCAGTCC TGGGCGCTGG ATCGCACAAG GCGGCAATGC TGACCACCGC 
TCCATCAAGG CCATCGTCGC GGACATGCTG TCGCTCGACG AGAAAGCCCG AGAGATCGAT 
CAAACCCTCG CTAAGTTGCT TGCACCGCTA TGA 

 

Protein sequence

MSNMPPPIDF PALLRTIRSA LDLTQEQLAE RLGVSFATVN RWEGGGNKPQ RAAQETILAL 
AREAGVEGAE SPSAADAAAQ VTRRRTGRAA AAPTTKPMEQ MLWDAACSIR GEKEAAKFKD 
YLLPLLFLKR LSDVFDDEIE RLAEEYGDRA TALEIAESDH SLLRFYLPPE ARWTVISGRE 
PFDWPRDVQG RSTAPRDIGE HLTRAVRAVV KHNPSLSGVI DVVDFAAERN GERDINPAKL 
RGVVETFSDP RYRLGLADVQ PDFLGRAYEY LLRKFAEGSG QSAGEFFTPT EVGFLMAHIL 
RPKPGETCHD YACGSAGLLI KLQLVARELD PTSRVPLKLS GQELQAESYA VAQMNAIIHD 
MEVELARGDT MINPKFRNAD GSIRQHDIVV ANPMWNQSFA PDIFAHDPFD RFRTAGGITS 
GKGDWAWLQH TLACMNDHGR AAVVLDTGAV TRGSGSKNED KERTIRKWFV EQDLIDGVIL 
LPENLFYNTT AAGVIVVLNK RKPAARKGKI VLLNASRHFS KGRPKNYLPE EDLRPLAAMY 
LKGEPVDGEL AVITKQQAEE ADYNLSPGRW IAQGGNADHR SIKAIVADML SLDEKAREID 
QTLAKLLAPL