Gene Dgeo_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2918 
Symbol 
ID5687750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_009939 
Strand- 
Start bp10670 
End bp11587 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID641262385 
ProductABC-type sugar transport system, permease component 
Protein accessionYP_001527659 
Protein GI158421432 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCCT CCCGCCCGCT GCCCCTGTCC CACTCCACCC GGCGCTCGCG GGAGGCGCGC 
TCCTGGCCCA CCGCGCTGCT GTTCCTGCTG CCCGCCATCG CCATCCTGGG TACCTTCAAC 
GTCTACCCGG CCCTGTACTC GCTGTACCTC AGCTTCTTCG AGTGGAACGG CTTCACACCG 
AACCGGGACT GGGTGGGTGG CGGCAACTAC GCGCGGCTGC TGACCTCCCC GGAATTCTGG 
AACAGCCTCA AGGTCACGGC GCTGTACGCG GGGGGCGTGA CCCTGACCTC CCTCGCGCTG 
GGCCTGCTCG TCGCAGTGCT GCTCAACCAA CCCATCCGGG GGCGCACGTT CTACCGCGTG 
CTGTACTTCC TGCCGGTCAT CACGCCGACC GTTGCTGCCG GGGTCGTCTG GAAGTACCTG 
TTCGACCCGA CGCAGGGTGC GGTGAACAGC CTGTTGGGAA GCGTGGGGCT GCACGGCCCG 
AACTGGCTGG TGGACCCCAA GTGGGCGCTC CTCGCCGTGA TCATCGTGGG CGTGTGGAAG 
CGGGTGGGCT TCAACGTGGT CGTGTACCTC GCCGCGCTGC AAGGCGTGCC CCGCGCGTAC 
TACGAAGCGG CGCAGATCGA TGGGGCCACC CCCTGGCAGC AACTGCGGTT CGTGACGGTG 
CCGCTGCTCG CCCCCACCAC CTTCTTCCTG GTGATCACCT CGCTGATCGA GGCGTTCCAG 
GTGTTCGACC TGGTGTACGT GATGACCGCT GGCGGTCCCC TGGGCGCAAC GGATGTCTTC 
GGCTTCTACC TGTACCGCGA GGGGTTCAAG TATTCCCAGC TCGGCTTCGC GTCCGCCATC 
GCGTACGTGA TGTTCGCCCT GATCTTCCTC GCCACCGTGG TCCAGTTCCG CTTCACCAGG 
GGAGGGCAGG ATGCGTAA
 
Protein sequence
MHASRPLPLS HSTRRSREAR SWPTALLFLL PAIAILGTFN VYPALYSLYL SFFEWNGFTP 
NRDWVGGGNY ARLLTSPEFW NSLKVTALYA GGVTLTSLAL GLLVAVLLNQ PIRGRTFYRV 
LYFLPVITPT VAAGVVWKYL FDPTQGAVNS LLGSVGLHGP NWLVDPKWAL LAVIIVGVWK 
RVGFNVVVYL AALQGVPRAY YEAAQIDGAT PWQQLRFVTV PLLAPTTFFL VITSLIEAFQ 
VFDLVYVMTA GGPLGATDVF GFYLYREGFK YSQLGFASAI AYVMFALIFL ATVVQFRFTR 
GGQDA