Gene Dgeo_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2701 
Symbol 
ID4073932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand
Start bp328159 
End bp328701 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID641228775 
ProductD-xylose-binding periplasmic protein precursor 
Protein accessionYP_594208 
Protein GI94972168 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4213] ABC-type xylose transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.614373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTTC TCGGCCCCGC CATTCAAGCC GGAAAGATCA AGAAGGTCGG CGAGCAGTAC 
ACCGAGGCCT GGAAGCCCGA GGTCGCACAG AACAACATGG AGCAGATTCT CACTGCAAAC
CGCAATCGAG TGGATGCCGT TGTCGCCAGC AACGACGGCA CGGCGGGCGG CGCGATCGCC
GCGCTTGCCG CCGTCGGCCT CGCCGGGAAG GTGCCGGTTT CTGGGCAGGA TGCCGACAAG
GCCGCTCTGA ATCGGATCGC GCGTGGTCTG CAGACTGGCA CCGTCTGGAA GGATGCCCGC
ACCCTAGCGA CGGAGGCGGC AAATATCGCT GTGCAACTCG CACGTGGCAC GAAGCCGAAC
GCCATCAAGG GGGCGCAGCC CTTCCATGGC GGACCCAAAA AGGTTGCTGT GAGTAGCATC
CTGCTGAAGC CGGTAGTGAT TACGAAGGCC AATCTTGGTC AGATCATCAG CGCCGGGTGG
GCCACCAAGG CGGAGATCTG TCAGGGCGTG AGTGGTGTCT CTGCACCCGC GGCCTGCCGC
TAA
 
Protein sequence
MDVLGPAIQA GKIKKVGEQY TEAWKPEVAQ NNMEQILTAN RNRVDAVVAS NDGTAGGAIA 
ALAAVGLAGK VPVSGQDADK AALNRIARGL QTGTVWKDAR TLATEAANIA VQLARGTKPN
AIKGAQPFHG GPKKVAVSSI LLKPVVITKA NLGQIISAGW ATKAEICQGV SGVSAPAACR