| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2701 |
|---|
| Symbol | |
|---|
| ID | 4073932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | - |
|---|
| Start bp | 328159 |
|---|
| End bp | 328701 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641228775 |
|---|
| Product | D-xylose-binding periplasmic protein precursor |
|---|
| Protein accession | YP_594208 |
|---|
| Protein GI | 94972168 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.614373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTTC TCGGCCCCGC CATTCAAGCC GGAAAGATCA AGAAGGTCGG CGAGCAGTAC
ACCGAGGCCT GGAAGCCCGA GGTCGCACAG AACAACATGG AGCAGATTCT CACTGCAAAC
CGCAATCGAG TGGATGCCGT TGTCGCCAGC AACGACGGCA CGGCGGGCGG CGCGATCGCC
GCGCTTGCCG CCGTCGGCCT CGCCGGGAAG GTGCCGGTTT CTGGGCAGGA TGCCGACAAG
GCCGCTCTGA ATCGGATCGC GCGTGGTCTG CAGACTGGCA CCGTCTGGAA GGATGCCCGC
ACCCTAGCGA CGGAGGCGGC AAATATCGCT GTGCAACTCG CACGTGGCAC GAAGCCGAAC
GCCATCAAGG GGGCGCAGCC CTTCCATGGC GGACCCAAAA AGGTTGCTGT GAGTAGCATC
CTGCTGAAGC CGGTAGTGAT TACGAAGGCC AATCTTGGTC AGATCATCAG CGCCGGGTGG
GCCACCAAGG CGGAGATCTG TCAGGGCGTG AGTGGTGTCT CTGCACCCGC GGCCTGCCGC
TAA
|
|---|
| Protein sequence | MDVLGPAIQA GKIKKVGEQY TEAWKPEVAQ NNMEQILTAN RNRVDAVVAS NDGTAGGAIA
ALAAVGLAGK VPVSGQDADK AALNRIARGL QTGTVWKDAR TLATEAANIA VQLARGTKPN
AIKGAQPFHG GPKKVAVSSI LLKPVVITKA NLGQIISAGW ATKAEICQGV SGVSAPAACR
|
|---|
| |