Gene Dgeo_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2169 
Symbol 
ID4058904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2285116 
End bp2285823 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content69% 
IMG OID641231210 
ProductABC transporter related 
Protein accessionYP_605632 
Protein GI94986268 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGG TCCGTGACCT GAGCGTCCAC TACGGCCCCT TCCGGGCGCT GCACGACGTG 
AATCTCACCG TGCAGCGGGG CGAGATCGTG GTGCTGCTGG GTGCGAACGG GGCGGGCAAG
AGCACCCTCT TCCGCACCCT CAGCGGCTTG CAGCGGCCCT CCTCGGGCAC GGCCACCTGG
AACGGTGTGC CGCTGACCGG AGGCAAACCG GAGTTCAATG TGGCGCGCGG CGTTTCGCAG
TGCCCGGAAG GCCGCCTGCT GTTTCCCGAC CTCAGCGTGG AGAAAAACCT GCGGCTAGGG
GCCTATGTGC ATCGCCGGGA CGCGGCTGGG ACTGCGCAGG AGCTGGAGCG GGTGTATGCC
CTCTTCCCTG CCCTGGTCGA AAAACGGCAC GCGCCCGCCG GGAGCCTGTC GGGCGGGCAG
CAGCAGATGG TCGCCATCGC CCGTGCGCTG ATGGCCCGCC CAGAGCTGCT GCTGCTCGAC
GAACCCTCGC TGGGCCTCGC ACCCCTCGTC GTCGAGCAGG TCTTTGAGGC GGTGCAGCGG
GTCAACGAGG CGGGCGTCAG CGTGCTGCTG GCGGAGCAGA ACGCCTTTGC TGCGCTGGGT
ATTGCGCACC GGGGCTACGT GCTGGAGGGC GGGCGCGTCG CCTTACAGGG CAGCCAGGGC
GACCTGCTGG GGAATGACCG GGTGCGAAGC GCGTACCTGG GGGTGTGA
 
Protein sequence
MLEVRDLSVH YGPFRALHDV NLTVQRGEIV VLLGANGAGK STLFRTLSGL QRPSSGTATW 
NGVPLTGGKP EFNVARGVSQ CPEGRLLFPD LSVEKNLRLG AYVHRRDAAG TAQELERVYA
LFPALVEKRH APAGSLSGGQ QQMVAIARAL MARPELLLLD EPSLGLAPLV VEQVFEAVQR
VNEAGVSVLL AEQNAFAALG IAHRGYVLEG GRVALQGSQG DLLGNDRVRS AYLGV