Gene Dgeo_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2029 
Symbol 
ID4058375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2137427 
End bp2138167 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID641231068 
ProductABC transporter related 
Protein accessionYP_605492 
Protein GI94986128 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.178802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC CCGCCGCCTC CTCCACCCGG CCCGCCGCGC CGCAGTCGCC CCTGCTCGAA 
GTCCGCGACC TGAACGCCTT TTACGGCCAG AGCCACGTCC TGCATGGGGT GAATCTGCAC
GTCATGCCCG GCGAAGTGGT CAGCCTGATT GGCCGCAACG GCGCGGGCAA GACGACCACC
CTGAAGAGCA TCATGGGCGT GCTCAGAAGC CGCACCGGAC AGATCATCTT TGACGGACAA
GACATCCTCC GGCTCCCCAG CCACCGCATC GCAGCGCGGG GCCTCGCCTG GGTGCCAGAA
GAGCGGGCCA TCATGAGCAG CCTCTCGGTG CGCGAGAACC TCGAGCTTCC CCCGGCGCGG
CCCGGCGGCT GGAGCACCGA ACGCGCGCTC GAAGCTTTCC CGGTGCTGCG CGAACGCGGC
CACCATCCCG GCTCCAAGCT CTCGGGAGGC GAACAGCAGA TGCTGGCCAT CGTGCGGGTG
CTGCGCAGTG GCCCCAAGCT CCTGCTGCTG GACGAACCCA GTGAGGGCCT GGCGCCCGTG
ATTGTGCAGC GCATCGGCGA CATGCTGGCC GAGCTGCGCC GCGAGGGCCT GAGTGTGATT
CTGGTTGAAC AGAACCTCAA ATTCGCCACC CGCCTGGCCG ACCGCCACTA CGTCCTCGTG
GATGGGCACG TGGTGGACGA GGTACACGCG GCTGAGGTGG AGGCCCGCCG CGCGGACCTG
CTGCGTCTCC TGAGTGTTTA G
 
Protein sequence
MSAPAASSTR PAAPQSPLLE VRDLNAFYGQ SHVLHGVNLH VMPGEVVSLI GRNGAGKTTT 
LKSIMGVLRS RTGQIIFDGQ DILRLPSHRI AARGLAWVPE ERAIMSSLSV RENLELPPAR
PGGWSTERAL EAFPVLRERG HHPGSKLSGG EQQMLAIVRV LRSGPKLLLL DEPSEGLAPV
IVQRIGDMLA ELRREGLSVI LVEQNLKFAT RLADRHYVLV DGHVVDEVHA AEVEARRADL
LRLLSV