Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2029 |
Symbol | |
ID | 4058375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 2137427 |
End bp | 2138167 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641231068 |
Product | ABC transporter related |
Protein accession | YP_605492 |
Protein GI | 94986128 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.178802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCGC CCGCCGCCTC CTCCACCCGG CCCGCCGCGC CGCAGTCGCC CCTGCTCGAA GTCCGCGACC TGAACGCCTT TTACGGCCAG AGCCACGTCC TGCATGGGGT GAATCTGCAC GTCATGCCCG GCGAAGTGGT CAGCCTGATT GGCCGCAACG GCGCGGGCAA GACGACCACC CTGAAGAGCA TCATGGGCGT GCTCAGAAGC CGCACCGGAC AGATCATCTT TGACGGACAA GACATCCTCC GGCTCCCCAG CCACCGCATC GCAGCGCGGG GCCTCGCCTG GGTGCCAGAA GAGCGGGCCA TCATGAGCAG CCTCTCGGTG CGCGAGAACC TCGAGCTTCC CCCGGCGCGG CCCGGCGGCT GGAGCACCGA ACGCGCGCTC GAAGCTTTCC CGGTGCTGCG CGAACGCGGC CACCATCCCG GCTCCAAGCT CTCGGGAGGC GAACAGCAGA TGCTGGCCAT CGTGCGGGTG CTGCGCAGTG GCCCCAAGCT CCTGCTGCTG GACGAACCCA GTGAGGGCCT GGCGCCCGTG ATTGTGCAGC GCATCGGCGA CATGCTGGCC GAGCTGCGCC GCGAGGGCCT GAGTGTGATT CTGGTTGAAC AGAACCTCAA ATTCGCCACC CGCCTGGCCG ACCGCCACTA CGTCCTCGTG GATGGGCACG TGGTGGACGA GGTACACGCG GCTGAGGTGG AGGCCCGCCG CGCGGACCTG CTGCGTCTCC TGAGTGTTTA G
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Protein sequence | MSAPAASSTR PAAPQSPLLE VRDLNAFYGQ SHVLHGVNLH VMPGEVVSLI GRNGAGKTTT LKSIMGVLRS RTGQIIFDGQ DILRLPSHRI AARGLAWVPE ERAIMSSLSV RENLELPPAR PGGWSTERAL EAFPVLRERG HHPGSKLSGG EQQMLAIVRV LRSGPKLLLL DEPSEGLAPV IVQRIGDMLA ELRREGLSVI LVEQNLKFAT RLADRHYVLV DGHVVDEVHA AEVEARRADL LRLLSV
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