Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1861 |
Symbol | rpsC |
ID | 4057591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1961611 |
End bp | 1962357 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641230889 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_605325 |
Protein GI | 94985961 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.10507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAACA AGATCAACCC CAACGGCTTC CGCCTGGGCA TCACCAAGGG CTGGAACAGC CGCTGGTACG CCGGGAAGAA GCAGTACAGC CAGCTTCTGA AGGAAGACGA GAAGATCCGT AAGCTGGTCA GCCAGAAGCT GGCTGCCGCC GGGATCGCCC GGATCGAGAT TGAGCGTGCG GGCCAGCAGG TCAACGTGAT CATCTCTGCG GCCAAGCCGG GTATCGTGAT CGGCAAGGGC GGCGAGAGCA TCAAGCAGCT GCGCGGCGAG ATCGAGCGCC TGGTCAGCGC CGGGACAGTG GCGGTCAACG TCGCCGAGAT TCCCAATCCC AACATCAGTG CGCCGCTGGT GGCCCTGCGG ATCGCCGAGC AGATCGAGCG CCGATTCGCC TTCCGCCGCG CGATGAAGCA AGCCGCGCAG CGCGTTATGG AGTCGGGAGC TCGCGGTGTC AAGGTGATTT TGAGTGGTCG CCTGGGCGGT GCTGAGCAGG CCCGCACCGA AAAGGTGCTC GAAGGCCGCG TACCGCTGCA TACTCTGCGC GCCGACATCG ACTACGGTAC CGCCCGTGCC GAGACGACCT ACGGTTCACT GGGCATCAAG GTGCTGGTGT TTAACGGTGA AGTGATCGGG GGTAAGACCG AGACGCTGGC CCGGCCCCCC CGCAAGAGTG ATGAGCGCCG CCGCGAAGAT GGCGAGCGTC CCAGCCGCCG CCGTCCGACC GCGCGGCGTC GCCCCGGAGG TGAGTGA
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Protein sequence | MGNKINPNGF RLGITKGWNS RWYAGKKQYS QLLKEDEKIR KLVSQKLAAA GIARIEIERA GQQVNVIISA AKPGIVIGKG GESIKQLRGE IERLVSAGTV AVNVAEIPNP NISAPLVALR IAEQIERRFA FRRAMKQAAQ RVMESGARGV KVILSGRLGG AEQARTEKVL EGRVPLHTLR ADIDYGTARA ETTYGSLGIK VLVFNGEVIG GKTETLARPP RKSDERRRED GERPSRRRPT ARRRPGGE
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