| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1562 |
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| Symbol | |
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| ID | 4057253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1662136 |
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| End bp | 1663140 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641230583 |
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| Product | transketolase, central region |
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| Protein accession | YP_605026 |
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| Protein GI | 94985662 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.386983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.558748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA CCCCAGCCAC CCAAACCAGA ACCATGACGA TGGTCGCCGC CATCAACGAC
GCACTCGCCC TCGCGCTGGA ACGCGACCCT GCCGTCCACA TCTTCGGGGA GGACGTGGGC
GTAATGGGGG GCGTCTTCCG CGCGACGGAC GGCCTGCAAG CGCGCTTTGG GGCGGAACGG
GTGTTCGATA CGCCGCTGGC TGAGGCGGGA ATTATCGGCA TGGGCATCGG CATGGGCTTG
GCGGGACTCA GGCCCATCGC GGAAATCCAG TTCGCGGGCT TCCTGTATCC GGCGCTCGAT
CAGGTGCTGT CTCACCTGGG CCGCTACCGC CACCGCACCC GTAGCCGCTA CCACGTCCCG
ATGGTGGTGC GCGCGCCCTA CGGCGGCGGT GTCCATACCC CCGAGCAACA CGCCGACAGC
CCCGAGGCGA TTTTGGCCCA CACGCCCGGC GTCAAGGTCG TGATCCCCAG CACGCCGCGC
GACGCCAAGG GCCTGCTCCT CGCCGCCACC GAGGACCCCG ATCCGGTGTT CTTCTTCGAG
GCAATCAAGC TCTACCGCTC GGTGAAGGAG GAGGTGCCGG AGGAGTACTA CACCGTGCCG
CTCGGCAAGG CGCGCGTGGT GACGGAGGGC GACGACGTGA CCGTGATCGC CTACGGCGGC
ATGGTCGAGG TCGCGCAGAA GGCGGCCGAC GCCGCCCGTG CCCACGGCAT CGGGGTGGAG
GTCTTGGACC TGCGCACGCT CGTGCCACTC GACACCGCGA CGATTCTCGA AAGTGTCGCC
AAGACGGGCC GGGTGGTCAT CGTGACCGAG GCGCCCCGCA CGAACGGCTT TCACAGCGAA
ATCAGCGCCA CCATCGCGGA GGAGGCCATC GAATCCCTGC AGGCCCCCAT CGTGCGCGTG
ACGGGCTTTG ACGCGCCCTA CCCGCCCTTT ACCTCCATCG AGGATGTGTA CCGCCCAAAC
CCGGTGCGGG TGGCCAAGGC GATCCGGCAG GTGATGGCGT ACTAA
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| Protein sequence | MTATPATQTR TMTMVAAIND ALALALERDP AVHIFGEDVG VMGGVFRATD GLQARFGAER
VFDTPLAEAG IIGMGIGMGL AGLRPIAEIQ FAGFLYPALD QVLSHLGRYR HRTRSRYHVP
MVVRAPYGGG VHTPEQHADS PEAILAHTPG VKVVIPSTPR DAKGLLLAAT EDPDPVFFFE
AIKLYRSVKE EVPEEYYTVP LGKARVVTEG DDVTVIAYGG MVEVAQKAAD AARAHGIGVE
VLDLRTLVPL DTATILESVA KTGRVVIVTE APRTNGFHSE ISATIAEEAI ESLQAPIVRV
TGFDAPYPPF TSIEDVYRPN PVRVAKAIRQ VMAY
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