| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1219 |
|---|
| Symbol | |
|---|
| ID | 4057729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 1298913 |
|---|
| End bp | 1300391 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641230234 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_604685 |
|---|
| Protein GI | 94985321 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0656786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.678095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCCTA TCCTTCCCCC CGTCTCCCTC CCGGCAGGCT TTATCCGTGC CCAAGACGTG
CTCGACGAAC GCCTCAGCCC CGCCGAGGTC CGGACGCTCG ACATGCGCTA CGGCAACGAG
GAACTGCTGT TCGGCCTGAA CCTGCTGGGG TTGGCAGGAC CTTTTTACCG GGTAACGCCC
TGGGAGTTGG AAGACGAACA CGGTGTGCGG CGCATCAACG CCTCGGGGTA CGCGGCGGTG
CCATTTGGGG ACATGCCACC GGTGGTGACC CGCTTCCTCC ACGAGTACCT GGAGAAAAAC
CGAGCGATGG GGCTGCCGCA GCAGTCGAGT TCGCCCTGGC GCGCAGCCCT TCAGACCAAT
CTGGTGCGGC TGCTCGCGCG CGAACTGCCC TCACACAGCG ACTCGCAGGT CTTCTTCTGC
TCCAGCGGCA CCGAGGCCAT CGAGGGGGCG CTGAAGTTTG CCAAGGCGTG GCGGCCCCGC
GCCAAGTTCT ACATCTCCTT TTCCAGCGGC TATCACGGCA AGACCCTCGG AAGTCTCAGC
CTGACGCCCA ACCCCGAGTA CCAGGACATC TTCCGCCCGC TGGTGCCCGG TGCCCTCACC
AGCCCCTACG GCGATCTGGA CGCGCTGACG CGGCTCATCC GACGGCTGGG GCCGGACAAC
GTGGTCGCGG TGCTGGTTGA GCCGATCCAA GGCGAGGGTG GCGTGAACAT TCCTCCGCCC
GGCTTCCTGC GCGGGGTGGG TGAACTGTGC CGGAAGCACG GCATCGTCTG CATCGCGGAC
GAGATCCAGA CTGGCCTAGG CCGCACCGGG CACTGGTTTG AGTCGGCGGC GCAGGGCCTC
GACCCGGACA TCCTGACGCT CGCCAAGCCG CTGGGTGGGG GGATGACGGC GGTGGGCGCG
ACGATCGTGC GGCACCCCAT CTACAAAAAG ATGCTGGGCG GCCTCAGCTC CAAGCGGCAC
TCGAACACCT TTGGCGGCAA CGCGCTGGCG ATGGCAGTGG GGCTGAAGTC GCTCGAATAC
CTGATCGAAT GCGACCTGCC CGCGCGCAGT GCCCGCCTGG GAGCCGCCGG ACTCGACCGG
CTGCGCGCCA TCGGGCGGCG GTATCCCCGC CTGCTGGAAG AGGTGCGCGG CCAGGGCCTG
CTGCTCGCCC TGCAGTTCAA GCCGATGGTG GGCGTGCCTC TCCCGGGCGT GCTGAAGGAA
CTGGTGTTTG AGGCGACCGC CATTCTGGCC CTGCGCGAAC TGCATGTGTC GGGTGTGATG
GCCAACCTCA GTCTTAGCTC CAAACGGACG GTCCGCCTTA CCCCCGCCCT CGACATGCCG
GAGGACGTCT TCGAACGCCT GTTGGAACGG GTTGAAGCCT TTGCCGGGCG CAACCCGGCT
TCCCGCTCCC TGCTGACCAA TACGCCGCCC GCCATGACCG CGCGGCTGGC GAAGTTCGCG
GCAAGCAAGC CGAAGAGGCG GACGGAGAGC GACGGGTAG
|
|---|
| Protein sequence | MTPILPPVSL PAGFIRAQDV LDERLSPAEV RTLDMRYGNE ELLFGLNLLG LAGPFYRVTP
WELEDEHGVR RINASGYAAV PFGDMPPVVT RFLHEYLEKN RAMGLPQQSS SPWRAALQTN
LVRLLARELP SHSDSQVFFC SSGTEAIEGA LKFAKAWRPR AKFYISFSSG YHGKTLGSLS
LTPNPEYQDI FRPLVPGALT SPYGDLDALT RLIRRLGPDN VVAVLVEPIQ GEGGVNIPPP
GFLRGVGELC RKHGIVCIAD EIQTGLGRTG HWFESAAQGL DPDILTLAKP LGGGMTAVGA
TIVRHPIYKK MLGGLSSKRH SNTFGGNALA MAVGLKSLEY LIECDLPARS ARLGAAGLDR
LRAIGRRYPR LLEEVRGQGL LLALQFKPMV GVPLPGVLKE LVFEATAILA LRELHVSGVM
ANLSLSSKRT VRLTPALDMP EDVFERLLER VEAFAGRNPA SRSLLTNTPP AMTARLAKFA
ASKPKRRTES DG
|
|---|
| |