Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0255 |
Symbol | |
ID | 4058540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 242553 |
End bp | 246521 |
Gene Length | 3969 bp |
Protein Length | 1322 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641229257 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_603727 |
Protein GI | 94984363 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG CCGAACCGAC TGCTCCCCAC ATTCATCTGC CGGACGGCTC CTGCTGCGGA CCCAAAAAGT TCGCGCACCT GCACCAGCAC ACCCAGTACA GCCTGCTTGA CGGCGCGGCC AAGCTCAAGG ACCTGCTGAA GTGGGTCAAA GAGGTCACGC CCCACGACCC CGCCTGCGCG ATGACGGACC ACGGCAACAT GCATGGCGCG GTGCATTTCT ACAACTACGC CTCACAACTG GGTGTGAAGC CGATTCTGGG CTATGAAGCC TATGTCGTCC CCGGCTTCGG CACGCGGCGC GACAAGAAAC CCGGCGTGAG CGGCGAGAAG GGCATCTTCC ACCTCACCCT GCTGGCCCGT GACTTTACCG GCTACCAGAA CCTCTGCCGC CTGAGCAGCC GCGGCTACAC CGAGGGCTAC TATTACAAGC CGCGCATCGA CCACGAACTC TTGCAGGAGC ATCACCAGGG GGTCATTGCC TTTTCCGGCT GCCTGGGGTC TGAGGTGCAG CAACTCCTCC TCCAGGGCCG CGAGGACGAG GCTAAGGCGC GCCTGCTGTG GTACCGCGAC CTCTTTGGCG AGAACTACTT CATCGAGATT CAGGACCACG GCCTGCCGGA ACAGAAGCGG AATAACCCCA TCCTGCGAGC CTGGGCGCAG GAACTCGGCA TCGGGATGGT CGCCACGAAC GACGGTCATT ACGTCAAAAA GACCGACGCG ACGGCTCACG AAGCTCTGCT TGCCATCCAG ACCAAAGCGA CCCTGGCCGA CGAGAATCGC TTCAAGTTTC CCTGCGACGA GTTCTATGTG AAGGGCCTGG AGGAGATGCA GAAGGCCTTG CCGGTCGCCG AGTGGGGCGA GGAGCCCTTC GACAACACCG CCCACATCGC CTCCATCTGC AACGTGGACC TGCCGGTGGG CAAGAAGCGC GTGTACCAGA TGCCCGCCCT CCCCATTCCG GAGGGCCGCA CGATGGCCGA GGAACTGCGG GTGCAGACGT ACCGCGGCGC CATGAAACGG TATCCAGCGC ACGTGACGGA GGGGCTGCTG CGTGACTACG CGCTGCGCTC ACTGGAGGCC CTCGGGCCGG AGGACGGTGC CAGAGTCCTG GTCCGCGTGG GGGGGGCTGA CCCCGCCACC TGCGACCTCG AAACGCTCTT TACTCTCCTG GCCTTCATGG GCAGCGAGTG GGAGGCGCGC GGCAAGGCGG CGGGGGAGAA GTACACGCCT TACCCGGCGC TGGAGGCCAT GGAAGCGGCA GCGGCGGCCG GAGCGCTCCC CCCTTACGCC CACGAGGATT GCCGCCGGGC CAGACAGGGG GACAGCGACA CGGCCATCGA ACTTGACCCG GAGGCGGACG ATTCCGAGAC CACCCGTTCC CACCACCAGC ACGCCCTGAC CGTCCTGCGC CGCGCCGAGT ACGAACTCTC GGTGATCAAC AACATGGGCT TTCCCGACTA TTTCCTGATC GTCGCGGACT ACATCGGCTG GGCGAAAGAT CAGGGCATCA GCGTGGGGCC GGGGCGCGGG TCGGGCGCGG GGTCGCTGGT CGCCTACGCC ATCCGCATCA CCAACCTCGA TCCGCTGGAA TTCGAGCTGC TGTTCGAGCG CTTTCTGAAC CCCGACCGCA TCTCCATGCC CGACTTCGAC ATCGACTTCA ACGATGCTCG CCGGGGTGAA GTCATCGGGT ACGTGCAGGG GAAGTACGGC GACGACAAGG TCGCACAGAT CGCCACCTTC GGGACGATGG CGAGCAAGGC TTGCCTCAAG GACGTGGCGC GCGTGATGGG CTTGGAGTAC GCCAAGGTCG ATAAGGTCTC CAAGCTCATC CCGATTAAGT TTGGCAAGAG CTACTCGCTG GAACAGGCCC GCGAGGCGGT TCCCGACATT CAACAGATGC TTGCCGAAGA TGCGCAGCTG CGGGAAGCCT ACGAGTTCGC CCAGAAACTC GAAGGGCTGA CCCGCCACGC TTCCGTCCAT GCGGCGGGGG TCGTGATCGG CAGGTCGCAG CTCACCGACC TCGTCCCCGT GATGCGCGAC ACCTCCGGCG AGGGCATGGT CTGCCAGTAC GACATGAAGG CCGTCGAGGA CATCGGCCTG ATCAAGATGG ACTTCCTGGG GCTGCGGACG CTGTCTTTCC TGGATGAAGC CAAACGCATC ATGCGCGAGT CAAAGGGCGT CGAGATCGAT TTCGACGCGA TTCCCTTCGA TGACGAAAAG ACCTTTGAAC TCCTCTCGCG CGGCGACACC AAGGGGGTCT TCCAGCTGGA AGGCGCGGGC ATCGCGGATG CCTCCCGCCG TCTCAAGCCC CGCCGTCTCG CGGACATCAT CGCGCTCTCG GCGCTCTACC GCCCCGGCCC GATGGAGAAT ATCCCCACCT ACGTCCGCCG CCACCACGGC GCCGAACCCG TTACCTACGA CGAATTCCCC CACAGCGCGA AGTGGCTGGA AAAAATCCTG GCAGAAACCT ACGGCATCCC CGTCTATCAG GAGCAGATCA TGCAGATCGC TTCGGAGGTG GCCGGGTACT CCCTGGGCGG GGCGGATCTG CTGCGCCGCG CGATGGGCAA AAAGGACGCC GAGGAGATGA AGCGCCAACG TCAGCTTTTT GTGGAGGGCG CTGAGAAAAA TGGCGTGCCG AAAGAGGAGG GAAACCGGCT ATTTGACCTG CTGGACGCCT TTGCCAACTA CGGCTTCAAC AAGAGTCACA GCGCCGCCTA CGGGGTCATC ACTTACCAGA CGGCCTGGCT CAAGGCCAAT TATCCGGTGG AATTCATGGC GGCGCTCCTC ACGGTTGAGC GGCGCGATTC CGACAAGGTC GCCGAGTACG TCAGTGATGC CCGCAAGATG AATGTGCGGG TGCTGCCCCC CGACATCAAC CGCTCTTCCG CGGACTTTGC GGTTCACGGT GAAGAAATTC TCTTCGGGTT GTACGCGATC AAGGGGCTGG GCGAGGGTGC GGTCCAAAAG ATTCTGGAGG AACGCGAGAA AAACGGGCCG TTCAGGTCGT TGGCCGACTT CTGCTCGCGG CTGGGCCACA AGGTCTGCAA CCGCAAGGCG ATGGAATCTC TGATCAAGTC GGGGGCCTTT GACGGCTTTG GCGAGCGCCA TCAGCTGATG GAGAGCCTGG AAGAGGCGAT GGCCTGGGCA CAGGGCGCGG CGGCGCTGGC GCAAAGCGGC ATGGACGCCC TCTTTGGCAT GGCGGAAACC GCGCCGGAGC CAAAACTCAA GGCAGGAGTC GCGCCGTACA CCGACCTTCA GCGCCTCGCC ATCGAGAAAG AAGCGCTGGG CCTCTACATC AGTGGCCATC CCCTCGAACA ACATGAGGGC CTGCGCGAGG CCGCGAGCTG CCGCATCAGT GACCTCGATA CCTGGTTCCA GGCGCAGAAT GTCGCGCCGG GCAAGCGCGT GAAGGCGGTG CTTGCCGGCA TGATCGAGAA TGTGGTCAAG AAGCCCACCA AGTCGGGCGG CATGATGGCC CGCTTCATCC TGGCCGACGA GTCGGGGCAG ACCGAACTGG TCGCCTTCTC GCGCGCCTAC GACCGTATCC AGGAAAAGCT GGTGAACGAC ACGCCCGCCC TGGTCATCGT CGAGCTGGAG TCCGAAGACG GCGGCCTGCG GGCCATCGCC GAAGAGATTG TCAGCGTAGA ACAGCTTGCC GAGGTGCCCA AGGTCATGTA TGTGACCATC GACCTGGAGA CGGCCACACC CGACGCGTTG GGTGAGTTCC AGAGTGTTCT GGACGAACAC GCCGGGTCCA TGCCCACCTA CCTGCGTCTG GAAACCCCCG AGCAGTTCGT GCTCTACCAG CTCGAACATA AAATAGGCAG CCCGGAGGCC ATTCGCGTCC TCAACAGCAC CTTCCCCTGG GCCAATGCCT ACCTCGCCTA TGACCAGAGC ACCATCCTGG GCCGTTTTGC GCCCAAGCCG CCCGCGTGGA TGGGGAAGGG GCGGGCGATG CAGGCGTGA
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Protein sequence | MTAAEPTAPH IHLPDGSCCG PKKFAHLHQH TQYSLLDGAA KLKDLLKWVK EVTPHDPACA MTDHGNMHGA VHFYNYASQL GVKPILGYEA YVVPGFGTRR DKKPGVSGEK GIFHLTLLAR DFTGYQNLCR LSSRGYTEGY YYKPRIDHEL LQEHHQGVIA FSGCLGSEVQ QLLLQGREDE AKARLLWYRD LFGENYFIEI QDHGLPEQKR NNPILRAWAQ ELGIGMVATN DGHYVKKTDA TAHEALLAIQ TKATLADENR FKFPCDEFYV KGLEEMQKAL PVAEWGEEPF DNTAHIASIC NVDLPVGKKR VYQMPALPIP EGRTMAEELR VQTYRGAMKR YPAHVTEGLL RDYALRSLEA LGPEDGARVL VRVGGADPAT CDLETLFTLL AFMGSEWEAR GKAAGEKYTP YPALEAMEAA AAAGALPPYA HEDCRRARQG DSDTAIELDP EADDSETTRS HHQHALTVLR RAEYELSVIN NMGFPDYFLI VADYIGWAKD QGISVGPGRG SGAGSLVAYA IRITNLDPLE FELLFERFLN PDRISMPDFD IDFNDARRGE VIGYVQGKYG DDKVAQIATF GTMASKACLK DVARVMGLEY AKVDKVSKLI PIKFGKSYSL EQAREAVPDI QQMLAEDAQL REAYEFAQKL EGLTRHASVH AAGVVIGRSQ LTDLVPVMRD TSGEGMVCQY DMKAVEDIGL IKMDFLGLRT LSFLDEAKRI MRESKGVEID FDAIPFDDEK TFELLSRGDT KGVFQLEGAG IADASRRLKP RRLADIIALS ALYRPGPMEN IPTYVRRHHG AEPVTYDEFP HSAKWLEKIL AETYGIPVYQ EQIMQIASEV AGYSLGGADL LRRAMGKKDA EEMKRQRQLF VEGAEKNGVP KEEGNRLFDL LDAFANYGFN KSHSAAYGVI TYQTAWLKAN YPVEFMAALL TVERRDSDKV AEYVSDARKM NVRVLPPDIN RSSADFAVHG EEILFGLYAI KGLGEGAVQK ILEEREKNGP FRSLADFCSR LGHKVCNRKA MESLIKSGAF DGFGERHQLM ESLEEAMAWA QGAAALAQSG MDALFGMAET APEPKLKAGV APYTDLQRLA IEKEALGLYI SGHPLEQHEG LREAASCRIS DLDTWFQAQN VAPGKRVKAV LAGMIENVVK KPTKSGGMMA RFILADESGQ TELVAFSRAY DRIQEKLVND TPALVIVELE SEDGGLRAIA EEIVSVEQLA EVPKVMYVTI DLETATPDAL GEFQSVLDEH AGSMPTYLRL ETPEQFVLYQ LEHKIGSPEA IRVLNSTFPW ANAYLAYDQS TILGRFAPKP PAWMGKGRAM QA
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