Gene Dgeo_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0169 
Symbol 
ID4058415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp156077 
End bp157219 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content63% 
IMG OID641229166 
Productpeptide chain release factor 2 
Protein accessionYP_603641 
Protein GI94984277 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0400859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.478253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGC CCCGCTCAAC GGGAGAAACG CGGAAGGGAG ACACGTCATG CAGGAACTGC 
TGGAAAAACT GGCGTCGCTC CGGGAGTACC TTTGACATTC CCGGCAAGAC GCGAAGGTTG
AACGAACTCG ACCGCGAACT CAGTGACCCG GAACTGTGGA ACAACCCCAG CCGTGCTCGG
CAAGTCACAC AGGAGGCCGG GAGCCTGCGC CGCATCGTGG ACGGCTACAG GACGCTGCAG
TCAGATGCAA ACAGTCTCAA CGAGATGCTG GAGATGGCGA GCGACGAGGA ACGCGCGCTG
CTGGCCGAGG AGCAGGACAC TATCCAGGCG CGGGTGGATG AGCTGTACCG CGAGACCCTC
TTCACCATGA AACACGCTGA CGCCCCCGCT ATCGTGCGGG TTAAGGGGGG CGCGGGCGGC
ACGGAGGCGC AAGACTGGGC CGGGATGCTC GCGCGCATGT ACATGCGTTG GGCCGAGCGG
CGAGGCTATA AGGTGGACGT GCTCGACGAG CAGCCCGGTG AGCAGGCCGG CTACCAGAGC
ATCGAATTCA TCATCCGTGG GGAAAAGGCA TTCGGGATGA TGGCGCCTGA ACACGGCGTC
CATCGCCTGG TGCGCGTCTC GCCCTTCGAT GCCAACAACC GCCGCCAGAC CTCCTTCGCG
TCCGTGGACG TAGTGCCTGA GGTGCCGGAA GAGCAGATCG ACATCGTGAT TCCCGATTCT
GACGTACGGG TGGACGTGTA CCGCTCACAG GGTGCCGGCG GGCAAGGGGT GAACACGACG
GACTCGGCAG TGCGCGTCAC CCACCTCCCC ACTGGGATCA TCGTGGCCAT TCAGGTCACA
CGCTCGCAGA TCAAGAACCG CGAGATGGCC TTCCAGATCC TCAAACAGCG CCTCTACGAC
TTGGAGATGC GCAAGCGCGA AGAGGAAGAA GCCAAGGCAC GCGGCGAACA AAAGAAGATC
GAGTGGGGCT CGCAGATCCG CTCCTACGTG CTCGATAAGC AGTATGTCAA GGACCACCGC
ACCGGACTCA TGAAGCACAA CCCCGATGAC GTGCTCGACG GTGATCTCGA CGACCTGATG
TGGGCGGGCC TAGAATGGAT GGCTGGGAAG CGGGCCGCCG AGGACGGTGC TGACGAAGAA
TAA
 
Protein sequence
MPAPRSTGET RKGDTSCRNC WKNWRRSGST FDIPGKTRRL NELDRELSDP ELWNNPSRAR 
QVTQEAGSLR RIVDGYRTLQ SDANSLNEML EMASDEERAL LAEEQDTIQA RVDELYRETL
FTMKHADAPA IVRVKGGAGG TEAQDWAGML ARMYMRWAER RGYKVDVLDE QPGEQAGYQS
IEFIIRGEKA FGMMAPEHGV HRLVRVSPFD ANNRRQTSFA SVDVVPEVPE EQIDIVIPDS
DVRVDVYRSQ GAGGQGVNTT DSAVRVTHLP TGIIVAIQVT RSQIKNREMA FQILKQRLYD
LEMRKREEEE AKARGEQKKI EWGSQIRSYV LDKQYVKDHR TGLMKHNPDD VLDGDLDDLM
WAGLEWMAGK RAAEDGADEE