Gene Dgeo_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0114 
Symbol 
ID4058711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp106584 
End bp107261 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID641229111 
Productcyclase/dehydrase 
Protein accessionYP_603586 
Protein GI94984222 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA ACATGTATAA CGCCAACAGC AAGGAAGACA GCAAGAGCAC AGATCAGAGC 
CGCCTGATCA GCGGTGCGGC GGGCGCTGGT CTGCTTTTGC TGGGCCTCAG GCGGCGGGGC
ATCCTGGGTT TGGGGATGGC GGCGGTGGGC GGCTATCTCG CGTACCGCGC GGCGACCGGC
AACGACCCGG TGATGGCGGC AGCTGGCCTC AGCGGCAATG CGACGGCGGC CAAGCCGATT
TTTGTGGAGC ACAGCATTGT GATTGACCGT CCAGCCCAGC AGGTCTATGA CTACTGGCGT
CAGCTTGAAA ACCTGCCCCG CATCATGAGC CACCTGGAGA GCGTGACGGT CCTTGACGAT
CGCCGCAGCC GCTGGGTCGC TAAGGCGCCG CTGGGCACCC ACGTGGAGTG GGAGGCCGAG
ATTGTGAATG ACAAGCCCGG CGAGCGCATC GGTTGGCACT CTCTCCCCGG TGCGACTGTG
GACAATGCGG GCAGCGTGCA GTTTGAGAGC CTGCCGAACG GCGGCACCCG TGTGCACGTC
GCGCTGTCTT ACCGTCCGCC TGCTGGAGCA CTGGGTGCAG CGGTCGCCAA GCTGTTTGGC
GAAGAACCCA GCCAGCAGAT CGCTGACGAC CTGCAGAAGT TCAAGCAAAC CTTCGAGGGC
GCAAACCCGC AGGCCTAA
 
Protein sequence
MSANMYNANS KEDSKSTDQS RLISGAAGAG LLLLGLRRRG ILGLGMAAVG GYLAYRAATG 
NDPVMAAAGL SGNATAAKPI FVEHSIVIDR PAQQVYDYWR QLENLPRIMS HLESVTVLDD
RRSRWVAKAP LGTHVEWEAE IVNDKPGERI GWHSLPGATV DNAGSVQFES LPNGGTRVHV
ALSYRPPAGA LGAAVAKLFG EEPSQQIADD LQKFKQTFEG ANPQA