| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5804 |
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| Symbol | |
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| ID | 8229420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6964627 |
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| End bp | 6967545 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644933649 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_003090157 |
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| Protein GI | 255039536 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.256305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.17905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCGA AACTCTTTTC TGAATTTTCC CCTTCGGACA AAAGCGCCTG GGAAAAGCTG
GTGGCAAAGG AGATGAAAAG CGGCAGTCCG TCCTGGGAAA TAGCGCCGGG CGTGCATTTC
AAGCCGTATG TAACAGCCGA AGAGCTCGAC TGGAAGGCGG TAGAAGCAAT TCAGCAGGCG
CAGCGCAAAA CGGTGGGCTG GATCAATGTC AATGCCGGGC CCATCACGCC GCCACGCCCG
CTCCAGATCC GGCTCGAAGG CAGTGATCCG GTAGCACAGC TGGTATCGGC ATTGGTCTCT
TTCTTTAATG GGTATTCCAA AAACAGCGTA GCGCCGGTGC CCGCATGGGA TCAGATTACA
TTCTCGGTTC CGATCGGTCC GCATTATCTG ACTGAAATCG CGAAACTGAG AGCGCTGCGA
TACCTTTTGA GCAAAATAGC GAAGGCATTG GCATGGCCGG AAGCGGAAAG TACCCCCTTC
ATTCACGCTG AAACCCCCAT TGAATACAAG GAAGACAAAC CGGATCACGC CAATCTGGTA
CGGGCCACGG CCGAGGCGAT GAGCGCCATT ATCGGCGGGT GCGATGCACT CACGGTGCTT
CCGTTTGATC AGTCGGATAA GGTATTGGCT CAGCGATTGG CCACAAACGT GTCCTACATT
CTCGAACATG AAAGCCATTT CGCGCAAGTG GCTGATCCGG CGGCAGGCGC GTTTGCGCTG
GAAGATATGA CCTTGAAGCT GGCTGCCGCA GCGTGGAAGC GTTTTGTGGA AGGTTTGGGG
AGTGACATTT TCAGCGAAAT TTCAGGTGAA AACGAAAATA CAGCGCCGCA AATCGTCCAG
CCAGCCCATT TCCATACCGC CGAAGGCATT TCGCTCAAAA GCCGGTTCAC TAAAAATGAT
ATTGCCGAGG CTGGCCACAT TGCATTTGGT GCAGGCACTC CCCCATATCT CCGCGGTCCG
TATGCAAGCA TGTATCTCGA ACGCCCGTGG ACGATCCGGC AATATGCAGG CTTCTCCACC
GCAGCCGAAT CCAATGCATT CTACCGCCGC AACCTCGCCG CCGGGCAAAA AGGGCTGTCC
GTCGCATTCG ACCTTGCGAC GCACCGCGGC TACGATTCCG ATCATGCGCG CGTGACGGGC
GACGTGGGTA AAGCGGGCGT AGCGATCGAC ACGGTGGAAG ATATGAAAAC ACTGTTCGAC
CAGATCCCGC TCGACCGGAT GTCGGTGTCG ATGACGATGA ACGGCGCCGT GATCCCCGTC
ATGGCCTTTT TTATCGTCGC TGCCGACGAG CAAGGAGTAA CTCCCGACCT ATTGACGGGA
ACGATCCAGA ACGACATTCT GAAAGAATTT ATGGTGCGGA ACACCTACAT TTATCCGCCC
GCGCCATCCA TGCGCATCGT AGGCGACATT TTCGCCTTTG CCTCACAGCA CATGCCACGC
TTTAACTCGA TCAGCATCAG CGGCTATCAC ATGCACGAGG CGGGCGCGCC GGCGCATATT
GAGCTCGCCT ACACACTCGC GGACGGGCTC GAATACATCC GCACGGGACT CGCCGCCGGC
ATTCCGATCG ACGATTTCGC CCCGAGGCTG TCGTTTTTCT GGGGAATCGG GATGAACCAC
TTTATGGAGA TCGCGAAAAT GCGGGCCGGG CGCATGCTTT GGGCTAAAAT CGTGAAGCAA
TTCAACCCGC AGAACGAGAA GTCGCTGATG CTCCGCACGC ATTGCCAAAC GAGCGGTTAC
AGCCTCACCG AGCAGGAGCC GTTCAATAAC ATTGCCCGCA CGACCATCGA AGCCCTGGCG
GCCGTCATGG GCCACACGCA ATCGCTGCAC ACCAATTCTT TCGACGAGGC CATTGCATTA
CCCACCGACT TTTCCGCCCG CATTGCCCGC GAAACGCAGC TCTTTATCCA AAACGAAACG
GATCTTTGCA AGGCCGTCGA TCCGTGGGGA GGTTCGTATT ATGTCGAATA CCTGACCGCA
CAACTTGCCG AAAAGGCTTG GGCGCTCATC GAGGAAGTGG AGGCATTGGG CGGCATGACC
AAAGCCATCG AAACCGGCCT TCCCAAAATG CGCATCGAGG AAGCCGCCGC CCGCAAGCAG
GCACGGATCG ATTCGGGTAA GGAGGTGATT GTAGGCATAA ATCGTTACCA GACTACTGAC
AAACAGCACT TTGAAATACT ACAAATTGAT AATGAGGCGG TAAGGAATGC GCAAATCGCC
CGGCTCAAAG CCGTCCGCCA AAGCCGAAAT GAGTCGGAAG TAAGCCAGGC CCTCGACCGC
ATTACTGAGG CATGCCGGCA GTCCGGCGGA CGCGATATGC ATACAAATCT GCTTGCATTA
GCCGTGGACG CGGCGCGGAA AAGAACTACA TTAGGAGAAA TTTCAATGGC GATGGAAAAG
GAATTCGGGC GATACCAGTC GGGCATCAGG GCAGTTTCGG GCGTGTACCG GACCGAAGTT
TCGGACGACG AAAACTTCCG GCGGGCCCGG GAAATGTCCG ATGACTTTGC CAGGCTGGAA
GGCCGCAGGC CACGGATTAT CGTTGCAAAA ATGGGCCAGG ACGGTCACGA CCGGGGTGCA
AAAGTAATCG CCACCAGCTT CGCCGACCTC GGTTTCGATG TCGACATTGC CCCGCTTTTT
CAGACGCCCC GCGAAGTGGC GATGCAGGCG ATCGAAAACG ACGTGCATGT GATCGGCGCA
TCGAGCCTGG CAGCAGGACA TAAAACGCTC ATTCCCGAAC TGATCGGCGA ATTGAAGAAG
CTGGGCAGAG GTGATATGAT GGTCATCGCA GGCGGAGTGA TCCCCGAGCA GGATTATCCG
TTTCTTTATG AGGCAGGTGT AAAAGGAATT TTCGGCCCCG GAACCGTGAT TTCAGTGGCC
GCACAGGAGA TTCTGGCCAA ACTGATGCAG GAAAATTAG
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| Protein sequence | MSAKLFSEFS PSDKSAWEKL VAKEMKSGSP SWEIAPGVHF KPYVTAEELD WKAVEAIQQA
QRKTVGWINV NAGPITPPRP LQIRLEGSDP VAQLVSALVS FFNGYSKNSV APVPAWDQIT
FSVPIGPHYL TEIAKLRALR YLLSKIAKAL AWPEAESTPF IHAETPIEYK EDKPDHANLV
RATAEAMSAI IGGCDALTVL PFDQSDKVLA QRLATNVSYI LEHESHFAQV ADPAAGAFAL
EDMTLKLAAA AWKRFVEGLG SDIFSEISGE NENTAPQIVQ PAHFHTAEGI SLKSRFTKND
IAEAGHIAFG AGTPPYLRGP YASMYLERPW TIRQYAGFST AAESNAFYRR NLAAGQKGLS
VAFDLATHRG YDSDHARVTG DVGKAGVAID TVEDMKTLFD QIPLDRMSVS MTMNGAVIPV
MAFFIVAADE QGVTPDLLTG TIQNDILKEF MVRNTYIYPP APSMRIVGDI FAFASQHMPR
FNSISISGYH MHEAGAPAHI ELAYTLADGL EYIRTGLAAG IPIDDFAPRL SFFWGIGMNH
FMEIAKMRAG RMLWAKIVKQ FNPQNEKSLM LRTHCQTSGY SLTEQEPFNN IARTTIEALA
AVMGHTQSLH TNSFDEAIAL PTDFSARIAR ETQLFIQNET DLCKAVDPWG GSYYVEYLTA
QLAEKAWALI EEVEALGGMT KAIETGLPKM RIEEAAARKQ ARIDSGKEVI VGINRYQTTD
KQHFEILQID NEAVRNAQIA RLKAVRQSRN ESEVSQALDR ITEACRQSGG RDMHTNLLAL
AVDAARKRTT LGEISMAMEK EFGRYQSGIR AVSGVYRTEV SDDENFRRAR EMSDDFARLE
GRRPRIIVAK MGQDGHDRGA KVIATSFADL GFDVDIAPLF QTPREVAMQA IENDVHVIGA
SSLAAGHKTL IPELIGELKK LGRGDMMVIA GGVIPEQDYP FLYEAGVKGI FGPGTVISVA
AQEILAKLMQ EN
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