Gene Dfer_5793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5793 
Symbol 
ID8229409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6955205 
End bp6955882 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content49% 
IMG OID644933638 
Productprotein of unknown function DUF218 
Protein accessionYP_003090146 
Protein GI255039525 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACC GTTCGGCGGC GAAGGCTTTT ACAAAAGGTG CCAAAGAAGC GCCATACGAC 
GCGATTATCG TTCCCGGCTT TCCCTACAAT GGTGAAAAGT GGGACATGGT GCACCAGCTT
CGCATTCACT GGGCCTATTA TCTCTATTCG AAAGGTTATA CCAAAAACGT CATCTTTTCG
GGCGGCGCTG TGGCTACTCC GTACATTGAA AGCCGCGTGA TGGCTAACTA TGCCGAGGCG
CTGGGCATCC CGCGCGAGCA TTTGTTTACC GAAGAAAAAG CCCAGCACAG TACTGAAAAC
GTATATTATT CCTACCGGCT TGCAAAAGAG CGGGGCTTTA AGAAAATTGC GCTTTCCACC
GACCCGATCC AGACCAGCTA CATGAAGAAG TTTATCAAAA AGTACGAGCT TCCCATTGGC
CTGCTGCCCA CGGTGATCGA CACGGTGAAA ACGCTCAACG TGTACGAGCC GAAAGCCGAT
CATAGCAATG CCGTCGTGAA AGAAGGTTTT GTGAAACTGT CGGATAGGGA AGGGTTTTTC
AAACGCTTCC GGGGCACTAT GGGCAAGTTC ATTGTCTGGC ATGAAGAAGA TTTGAAAAAA
GCGAAATACA GAAGAAGATA CAAGGACCGG ATGATACCCT CTTCCGAACA AACAGGGAAC
AATAAAAGCG TACAATGA
 
Protein sequence
MLYRSAAKAF TKGAKEAPYD AIIVPGFPYN GEKWDMVHQL RIHWAYYLYS KGYTKNVIFS 
GGAVATPYIE SRVMANYAEA LGIPREHLFT EEKAQHSTEN VYYSYRLAKE RGFKKIALST
DPIQTSYMKK FIKKYELPIG LLPTVIDTVK TLNVYEPKAD HSNAVVKEGF VKLSDREGFF
KRFRGTMGKF IVWHEEDLKK AKYRRRYKDR MIPSSEQTGN NKSVQ