Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5745 |
Symbol | |
ID | 8229361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6899893 |
End bp | 6901269 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644933590 |
Product | protein of unknown function DUF162 |
Protein accession | YP_003090098 |
Protein GI | 255039477 |
COG category | [C] Energy production and conversion |
COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00670612 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCAAAA CAGTAATGGA GCACGCGGAC GCTTCCGAGG TGTTCAACAG AGACGAACCT TACGTAAACT GGCATGACGA AACCCTGTGG TTCGTGCGCC AGAAACGCGA TAAATCATCG AAACAACTCC CCGAATGGGA ACAGCTGCGC GACGCCGCGT CGGGTATCAA GCATTATGTA CTCTCGCACC TCGACGAGCT GCTGATATCT TTTGAACAAA AAGCAAAGGA AAACGGTGTG CAGGTGCATT GGGCAGCCAA TGCGGCCGAA CATAATGAGA TTGTGCTCGG GCTTTTGAAG AAGCACAAGA TCGACAAGAT GGTGAAAAGC AAGTCGATGC TCACCGAGGA ATGTCATATG AACGAATTCC TGCAAAAGAA CGGCATTGAA GTGATCGACA CCGACCTGGG CGAGCGCATC GTGCAGCTCC GCAACGAGCC GCCGAGCCAC ATCGTGCTAC CCGCTATCCA CCTGAAAAAG AAGGATATCG GCGATCTTTT CCATGAGCAC CTCGGCACCG ACGCCGGCGC TACCGACCCG CAATACCTCA CCGAAGCCGC CCGCCAGCAT TTACGCGACA AGTTTCTGAC ACGCCGCGCG GCTTTAACAG GCGTGAACTT CGCCGTAGCC GAAACCGGCG GTTTTGTTGT GTCAACCAAC GAAGGTAATG CCGATATGGG TGCGCATTTG GCCGACATTC ACATTGCCTG CATGGGTTTT GAGAAGATAA TTCCAAAGCA GGAACATCTG GGCGTTTTCC TCCGCCTGCT CGCCCGAAGC GCCACTGGTC AGCCGATTAC TACTTACAGC AGCCATTTCA AGAAGCCGCG CGAAGGGCAG GAAATGCACA TTGTGATCGT GGATAATGGG CGCAGTACGC AGCTGGGCCG GAAGGATTTC AGGAACTCAT TGAAATGCAT TCGCTGCGGA GCTTGTATGA ACACTTGTCC GGTTTACAGA AGAAGCGGCG GGCATAGCTA CCATAATGCC GTCGCCGGAC CGATCGGCTC CATTCTCGCG CCGAACCTGG ATATGACCAA AAATGCCGAT TTGCCGTTTG CAAGCACATT GTGCGGCAGT TGCTCCAACG TGTGCCCTGT GAAAATCGAC ATTCACGACC AGCTTTATAA ATGGAGACAA GTGCTGGCAA AAGAAGGCCA TGTGCCGAAA AGCAAGGAAA TAGGTATCCG CGCCATGTCG ACCATGCTGG CCGCGCCGAG GTTTTACCAA TGGTCGGGCA GGATGGGGCG GACGGTAATG CGCGCCATGC CGTTTATGGT CAATAATGCA TTGAACCCCT GGTACAAACA ACGCGATATG CCGGAGCCGC CGAAGGAAAG TTTCCGCGAT TGGTACGTCC GTAACAGAAA GAACTGA
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Protein sequence | MSKTVMEHAD ASEVFNRDEP YVNWHDETLW FVRQKRDKSS KQLPEWEQLR DAASGIKHYV LSHLDELLIS FEQKAKENGV QVHWAANAAE HNEIVLGLLK KHKIDKMVKS KSMLTEECHM NEFLQKNGIE VIDTDLGERI VQLRNEPPSH IVLPAIHLKK KDIGDLFHEH LGTDAGATDP QYLTEAARQH LRDKFLTRRA ALTGVNFAVA ETGGFVVSTN EGNADMGAHL ADIHIACMGF EKIIPKQEHL GVFLRLLARS ATGQPITTYS SHFKKPREGQ EMHIVIVDNG RSTQLGRKDF RNSLKCIRCG ACMNTCPVYR RSGGHSYHNA VAGPIGSILA PNLDMTKNAD LPFASTLCGS CSNVCPVKID IHDQLYKWRQ VLAKEGHVPK SKEIGIRAMS TMLAAPRFYQ WSGRMGRTVM RAMPFMVNNA LNPWYKQRDM PEPPKESFRD WYVRNRKN
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