Gene Dfer_5686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5686 
Symbol 
ID8229302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6833641 
End bp6835023 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content51% 
IMG OID644933532 
Producthypothetical protein 
Protein accessionYP_003090040 
Protein GI255039419 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA TTATACTCGC ATTTGCGCTG ATTATCTCCT TTCAAAGCCG CGGTCAAATT 
ACATTCATCG ACAGCAATAC CCCCTGGAAC GAGCTTTCCA AACAAGCCAC TGAGCAAGAC
AAGCTGATTT TTATCCATTT CGAAAACAGC GAATGCGTGC AATGCAACGA AGTCGCCTCC
CAGGGTTTCA GCGGCAAAGA TTTGAAAGAG TTGTTTGATG ACAATTTTAT TTCCATTCGT
TGCAATGTGA GCACGCCCAA CGGCCTGAGC CTAGCACGAA AATTTGCCAT CAGAAGCTCA
CTGATGTCGC TTTTCGTAGA TGCCAACGGC AATATCCTCC ATGTGAACAA TGGGTCTACG
GGCAATTCGG GCGCATATGA GTCAGGGGCG GAACTGGCAC TCAGCCGCAA GGGCCAAAAG
CAACTGGCCG ATTACGACAA GGAATACAAA GCAGGCGTGC GCGGGCTCGT GTTCCTGCGG
GAGTATATGA CCAAAAAACG CGAGGCATCC ATGCCCGTAG ACCAGTTACT CGACGAGTAC
GTAGCGTTTC TTCCTATTGA TTCGCTGGCC AATTTTCAAT CGGTCCAAAC CATCCTTGCA
TTCGCTCCGG CACTCAATTC TGCTGCCTAC AAAGCCATTA CCACCAAAAC ACCGCCTTCT
TTGCTGGATA GCATTTTCCA GGCTGGCTCG CCGGATAACC GCAAGATGAT GCGCGAAGGC
ATTATCGGCA ACACGTTCCG GCTTGCCGTT TGGAAACGGG ACGAACCACT GGCCGTCCGC
ACGGCCGAAT TTGCCCGCGA CGTACAGCGA AAAAGCCCGT CGAAAGGCCA GGTGGAGTAT
GCCAAAACAA TGGTGCAGTA TTATTACCAA ACCCGGGACA CCCTGCGGTA TCTGGAGCAG
GCCGTACAGC TGATGGAAAG CCATTACATG CCATTGACCG TCGACTCTCT CAATAAAATG
GACGACGCGG CCTTCCATGA GCAAAATACA GCCTTTACCA CCAAACGCGG CAAGCCCGAA
CAAGGCATCG TGGTACGGTC GATGGCGATC ATGCCGCCTT CGCAGTTTAT TTACAAGGAC
CTGAATGAAC ACGCCTACCA CTTCTACGAG CTCACGCGCG ACAAGGCATT ACTGGAAAAA
GCATTGGCCT GGTCCAAAAA GTCGATGGAA CTGGGCGATA GCAAAGGAAG AAGGGCACAA
ACGCCTTTCA AACTGGGCGA CCCGAATTGG ATGGATACTT ACGCCCACAT TCTTTACCGG
CTGGACAGAC GGGACGAGGC CATCGAATGG CAAACCAAAG CCATGGAAGC GCAGAAGATC
AGCGGGATGG CCTACCAATC CTTTGAAATA CGCCTCAACA AAATGAAGAC AGGCACATTG
TAG
 
Protein sequence
MKQIILAFAL IISFQSRGQI TFIDSNTPWN ELSKQATEQD KLIFIHFENS ECVQCNEVAS 
QGFSGKDLKE LFDDNFISIR CNVSTPNGLS LARKFAIRSS LMSLFVDANG NILHVNNGST
GNSGAYESGA ELALSRKGQK QLADYDKEYK AGVRGLVFLR EYMTKKREAS MPVDQLLDEY
VAFLPIDSLA NFQSVQTILA FAPALNSAAY KAITTKTPPS LLDSIFQAGS PDNRKMMREG
IIGNTFRLAV WKRDEPLAVR TAEFARDVQR KSPSKGQVEY AKTMVQYYYQ TRDTLRYLEQ
AVQLMESHYM PLTVDSLNKM DDAAFHEQNT AFTTKRGKPE QGIVVRSMAI MPPSQFIYKD
LNEHAYHFYE LTRDKALLEK ALAWSKKSME LGDSKGRRAQ TPFKLGDPNW MDTYAHILYR
LDRRDEAIEW QTKAMEAQKI SGMAYQSFEI RLNKMKTGTL