Gene Dfer_5683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5683 
Symbol 
ID8229299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6830166 
End bp6831914 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content56% 
IMG OID644933529 
ProductCellulose 1,4-beta-cellobiosidase 
Protein accessionYP_003090037 
Protein GI255039416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.330334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG TCCCGCATTT GGCCGCATTC CTGGCGGCCG TTGGTTTGTC ATTGTCCTCC 
TCGCACGCAC AGCAGCATTC GGATGCGATC CGGTTAAATC AGATCGGTTT TTACCCTGCG
GCGCCCAAGG TCGCGGTCGT TGCCGGTGAC GGTTTCGAGG CATTTGAGGT GAAGGATGCC
AAATCCGGGA AAACAGTGCT GAAAGGCATG CTTGGACCAG TACGGACCAG CCAGCATTCT
GGAAAACATA CGCGCGTGGC CGATTTCAGC CAGCTTCGCA AACCGGGCAA CTACACGATC
GACGTGCCGG GTCTTGGGAA ATCCGCGCCA TTTAGCGTGG GTGCCCGCGT GCACCGCGAA
GTGGCCGAGG CATCGCTTAA AGGGTTTTAC TTCCAGCGGG CCTCCACCGA ATTGCCCGAG
AAATACGCCG GTAAATGGGC CCGCAAAGCA GGTCATCCCG ACGATAAGGT GCTGATCCAC
GCCTCGGCTG TGTCCGACGG ACGGCCCGAA AATACCTTAA TATCCTCCAC CCGGGGCTGG
TATGATGCGG GCGATTACAA CAAGTATATT GTGAATTCCG GCATTACTAT GGGCACTTTG
CTGTCGTTGT ACGAAGACTT CCCACTCTTT TTCGAAGATT TTAATATCAA TATCCCCGAA
AGCAACAATG GCGTTCCCGA TCTGCTCGAT GAAGTGGCCT GGAACCTGCG CTGGATGCTC
ACCATGCAGG ACCCGGCCGA TGGCGGTGTG TACCACAAGC TGACCAACCC GCGCTTCGAC
GGCATGATTA TGCCCGACGC CGCCAAAAAT CCGCGGTACG TCGTCCAGAA GGGCACCGCG
GCCACGCTTG ACTTCGTGGC AGTAATGGCG CAGGCCTCGC GGGTATTTAA AAATTTCGAC
AACAAATTCC CCGGGCTCGC TGACTCGTGT ACCACTGCGG CCGTGCGAGG CTGGCAATGG
GCCGGGAAAA ATCCCGCCGT GCTGTATGAG CAGGGCGAAA TGAACAAGCA ATTCGATCCC
GATGTGGTGA CTGGCGCTTA CGGAGACCGT TCGGTAAAGG ATGAATGGAT ATGGGCAGCC
AGCGAAATGT ACGCCATGAC GGGCAAACCC GAATACATTG AAAAAGTCGA TTTGGAGCTG
AACCAGCCAC TGGCACTGCC TACCTGGGGC AATGTGAAGA CGCTCGGATA TTACACACTG
GTTCGCTTTG GCGACAAGCT GAAACTGCCG GCCGAGCTGG CCGCGCCGCT GCGGAAGAGC
ATTGTGACCT ACGCGGATGG CCTTATTTCC GGACTGGAAA AGCAGCCTTA CCACACCGTA
ATGGGCAAAG TGGCTCAGGA TTATTCCTGG GGTAGCAGCT CGGTGGCCGC CAACCAGGGC
ATTGCACTCA TGTACGCCTA CCGGATCACG AAGGATCTGC ATCACTTGCA CGGCGCGCTG
GGTAACCTAG ATTACCTGCT TGGAAGAAAC GCCACCGGCT ATTGCTTCCT CACAGGCTTC
GGCAGCAAGC GCGTTATGCA CCCGCACCAC CGCCTTTCCA TTGCCGACGG CGTCGTCGAT
CCCTTGCCGG GGTTGCTTTC GGGCGGGCCA AATCCTGGTC AGCAGGACAA ATGCGCTGGA
TATCCCAACA AGTTTCCCGA CGAATCTTTC ATAGACCATG ATTGCTCGTA CGCTTCCAAC
GAGATCGCCA TCAACTGGAA TGCACCGATG GTGTACCTGG CGGCCGCATT GGAAGCGTCG
ATGAAATAG
 
Protein sequence
MKFVPHLAAF LAAVGLSLSS SHAQQHSDAI RLNQIGFYPA APKVAVVAGD GFEAFEVKDA 
KSGKTVLKGM LGPVRTSQHS GKHTRVADFS QLRKPGNYTI DVPGLGKSAP FSVGARVHRE
VAEASLKGFY FQRASTELPE KYAGKWARKA GHPDDKVLIH ASAVSDGRPE NTLISSTRGW
YDAGDYNKYI VNSGITMGTL LSLYEDFPLF FEDFNINIPE SNNGVPDLLD EVAWNLRWML
TMQDPADGGV YHKLTNPRFD GMIMPDAAKN PRYVVQKGTA ATLDFVAVMA QASRVFKNFD
NKFPGLADSC TTAAVRGWQW AGKNPAVLYE QGEMNKQFDP DVVTGAYGDR SVKDEWIWAA
SEMYAMTGKP EYIEKVDLEL NQPLALPTWG NVKTLGYYTL VRFGDKLKLP AELAAPLRKS
IVTYADGLIS GLEKQPYHTV MGKVAQDYSW GSSSVAANQG IALMYAYRIT KDLHHLHGAL
GNLDYLLGRN ATGYCFLTGF GSKRVMHPHH RLSIADGVVD PLPGLLSGGP NPGQQDKCAG
YPNKFPDESF IDHDCSYASN EIAINWNAPM VYLAAALEAS MK