Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5683 |
Symbol | |
ID | 8229299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6830166 |
End bp | 6831914 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644933529 |
Product | Cellulose 1,4-beta-cellobiosidase |
Protein accession | YP_003090037 |
Protein GI | 255039416 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.330334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTG TCCCGCATTT GGCCGCATTC CTGGCGGCCG TTGGTTTGTC ATTGTCCTCC TCGCACGCAC AGCAGCATTC GGATGCGATC CGGTTAAATC AGATCGGTTT TTACCCTGCG GCGCCCAAGG TCGCGGTCGT TGCCGGTGAC GGTTTCGAGG CATTTGAGGT GAAGGATGCC AAATCCGGGA AAACAGTGCT GAAAGGCATG CTTGGACCAG TACGGACCAG CCAGCATTCT GGAAAACATA CGCGCGTGGC CGATTTCAGC CAGCTTCGCA AACCGGGCAA CTACACGATC GACGTGCCGG GTCTTGGGAA ATCCGCGCCA TTTAGCGTGG GTGCCCGCGT GCACCGCGAA GTGGCCGAGG CATCGCTTAA AGGGTTTTAC TTCCAGCGGG CCTCCACCGA ATTGCCCGAG AAATACGCCG GTAAATGGGC CCGCAAAGCA GGTCATCCCG ACGATAAGGT GCTGATCCAC GCCTCGGCTG TGTCCGACGG ACGGCCCGAA AATACCTTAA TATCCTCCAC CCGGGGCTGG TATGATGCGG GCGATTACAA CAAGTATATT GTGAATTCCG GCATTACTAT GGGCACTTTG CTGTCGTTGT ACGAAGACTT CCCACTCTTT TTCGAAGATT TTAATATCAA TATCCCCGAA AGCAACAATG GCGTTCCCGA TCTGCTCGAT GAAGTGGCCT GGAACCTGCG CTGGATGCTC ACCATGCAGG ACCCGGCCGA TGGCGGTGTG TACCACAAGC TGACCAACCC GCGCTTCGAC GGCATGATTA TGCCCGACGC CGCCAAAAAT CCGCGGTACG TCGTCCAGAA GGGCACCGCG GCCACGCTTG ACTTCGTGGC AGTAATGGCG CAGGCCTCGC GGGTATTTAA AAATTTCGAC AACAAATTCC CCGGGCTCGC TGACTCGTGT ACCACTGCGG CCGTGCGAGG CTGGCAATGG GCCGGGAAAA ATCCCGCCGT GCTGTATGAG CAGGGCGAAA TGAACAAGCA ATTCGATCCC GATGTGGTGA CTGGCGCTTA CGGAGACCGT TCGGTAAAGG ATGAATGGAT ATGGGCAGCC AGCGAAATGT ACGCCATGAC GGGCAAACCC GAATACATTG AAAAAGTCGA TTTGGAGCTG AACCAGCCAC TGGCACTGCC TACCTGGGGC AATGTGAAGA CGCTCGGATA TTACACACTG GTTCGCTTTG GCGACAAGCT GAAACTGCCG GCCGAGCTGG CCGCGCCGCT GCGGAAGAGC ATTGTGACCT ACGCGGATGG CCTTATTTCC GGACTGGAAA AGCAGCCTTA CCACACCGTA ATGGGCAAAG TGGCTCAGGA TTATTCCTGG GGTAGCAGCT CGGTGGCCGC CAACCAGGGC ATTGCACTCA TGTACGCCTA CCGGATCACG AAGGATCTGC ATCACTTGCA CGGCGCGCTG GGTAACCTAG ATTACCTGCT TGGAAGAAAC GCCACCGGCT ATTGCTTCCT CACAGGCTTC GGCAGCAAGC GCGTTATGCA CCCGCACCAC CGCCTTTCCA TTGCCGACGG CGTCGTCGAT CCCTTGCCGG GGTTGCTTTC GGGCGGGCCA AATCCTGGTC AGCAGGACAA ATGCGCTGGA TATCCCAACA AGTTTCCCGA CGAATCTTTC ATAGACCATG ATTGCTCGTA CGCTTCCAAC GAGATCGCCA TCAACTGGAA TGCACCGATG GTGTACCTGG CGGCCGCATT GGAAGCGTCG ATGAAATAG
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Protein sequence | MKFVPHLAAF LAAVGLSLSS SHAQQHSDAI RLNQIGFYPA APKVAVVAGD GFEAFEVKDA KSGKTVLKGM LGPVRTSQHS GKHTRVADFS QLRKPGNYTI DVPGLGKSAP FSVGARVHRE VAEASLKGFY FQRASTELPE KYAGKWARKA GHPDDKVLIH ASAVSDGRPE NTLISSTRGW YDAGDYNKYI VNSGITMGTL LSLYEDFPLF FEDFNINIPE SNNGVPDLLD EVAWNLRWML TMQDPADGGV YHKLTNPRFD GMIMPDAAKN PRYVVQKGTA ATLDFVAVMA QASRVFKNFD NKFPGLADSC TTAAVRGWQW AGKNPAVLYE QGEMNKQFDP DVVTGAYGDR SVKDEWIWAA SEMYAMTGKP EYIEKVDLEL NQPLALPTWG NVKTLGYYTL VRFGDKLKLP AELAAPLRKS IVTYADGLIS GLEKQPYHTV MGKVAQDYSW GSSSVAANQG IALMYAYRIT KDLHHLHGAL GNLDYLLGRN ATGYCFLTGF GSKRVMHPHH RLSIADGVVD PLPGLLSGGP NPGQQDKCAG YPNKFPDESF IDHDCSYASN EIAINWNAPM VYLAAALEAS MK
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