| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5618 |
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| Symbol | |
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| ID | 8229234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6755424 |
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| End bp | 6756059 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644933465 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003089973 |
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| Protein GI | 255039352 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAACG ACCAGATCAA GAATATCATT TTCGACCTCG GCGACGTCAT TCTCAACATT
GACGTGCCCA TTGCTTCCAA GTCTTTCGCC GACCTGAGCG GACGCGAGCA GGCCGAAATA
CTCACTATTT TCAAGGAAAG CGAGATTTTC CGCCAGTTTG AAACCGGGAC GATGGACGAA
CCCTCATTCC GGAACTATGT GCGTGAAATC CTGAAATTCC CCGATCTGTC GGACGAAGCC
ATCGATACCG CCTGGAACAG TCTGCTGCTC GACCTCCCGC CCGAGCGCGT GGAGCTGCTC
AAAAAGCTGG CGACCAAATA CCGGCTGTTC CTGCTCAGCA ACACCAGTTC GATCCACATT
ACGCAGGTCA ACAAAATACT GAAAGCCTCC ACGGGCGTGG AAAGGCTGGA AGACCTGTTC
GAAATTGTTT TTCTTTCCTA CGAAATGGGC CTCATGAAGC CCGACACCCG TATTTACCAG
CAAGTGCTCG ACAAAGCCGG CCTGAAAGCG GAAGAAACGC TTTTCCTCGA CGACAATGCG
GACAATATCC GCGGCGCGGC GCAGCTCGGG ATCGAAACTA TTCACGTCCA AAAGCCGGTC
ACTATTCTGG AATACCTCCA AGACTATGCA GTCTAA
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| Protein sequence | MKNDQIKNII FDLGDVILNI DVPIASKSFA DLSGREQAEI LTIFKESEIF RQFETGTMDE
PSFRNYVREI LKFPDLSDEA IDTAWNSLLL DLPPERVELL KKLATKYRLF LLSNTSSIHI
TQVNKILKAS TGVERLEDLF EIVFLSYEMG LMKPDTRIYQ QVLDKAGLKA EETLFLDDNA
DNIRGAAQLG IETIHVQKPV TILEYLQDYA V
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