| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5537 |
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| Symbol | |
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| ID | 8229152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6666435 |
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| End bp | 6667562 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933384 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003089893 |
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| Protein GI | 255039272 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.728308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.481729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TCCTGTTCCG GACGGCGCTG TTTACCGCCA TTCCGATCAT TTTCTCATCC
TGCAATACCA ATCCCACGCA GGCAGTAGCG ACCGAAAAAC CGCAGGACTA CCCCGTGATG
ACCGTCCGCC CGGAAAGCGC CATGCTGCAT ATGGATTACC CCGCCCGGCT CGAAGGCAGG
CAAAACATTG AAATACGGCC GAAAGTCGAT GGATTTATTG ATAAAATATA CATTGAAGAG
GGGGCTATTG TCCGTAAAGG CCAGCCGCTG TTCTCGATTC ATGCGCCGCA ATACGAGCAG
GAAGTGAAGA CGGCCACCGC GGCGATCCGC AGTGCCGAAG CGGAAATGAA CCTGGCCCGG
ATGCAGGTAG AAAAAACGGG ACCGCTTGAA AAAGAAGGGA TTATCAGCAG CTATGAGCTG
AAATCGGCCG AGTATACGCT GCATGCCCGG GAAGCCACGC TGGCGCAGGC GAAGGCTAGC
CTGGCGAATG CGAAAAACAA TGTAGGCTAC ACGCAGATCA CCAGCCCGGT GGACGGTGTC
ATTGGCTTGA TCCCCTACAA GACGGGCAGC CTGGTAAGCA GCGCCTCGCC CCAGGCGCTG
ACGACCGTTT CGGATATCGG CGAGATGATC GCCTATTTTT CCTGGAACGA AAAGCAATAC
CTCGACTTTA CGTATAGTGC CGAAGGTGCA CAGCTCCGCG ATAAGCTGAA ATCCATTCCC
CCGGTGCGGC TGATCCTTGC CAACAAGCAG GAATATGCGC TAAAAGGGAA AATCGAGTCG
GTAGGCGGAC TGATTAACAC CACTACCGGG TCGATACCCG TCCGCGCGTC GTTCCAAAAC
CCGGCCAGGT TGCTCCGCAC CGGCGCCAGC GGGCTTATCC GCATTCCGAC GCATTTGAAA
GACGCCATAT TGGTCCCGGC AAAAGTCACA TTTGAATTGC AGGAAAAGAC TTTTGTATAC
ACCGTAAAAA AGGATGGCAC CGTACAAAGT ACTGAAATTC AAATACTCAA CACCGCACCC
GACGGCCGCT ACGTGGTGGG CCAGGGGCTC GCCGGCGGAG AGCAAGTGGT CACGGAAGGA
CTCCCCTCAC TCAAAGACGG CATGCGGATC AGGCCGGTGG TAAAATAG
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| Protein sequence | MKKILFRTAL FTAIPIIFSS CNTNPTQAVA TEKPQDYPVM TVRPESAMLH MDYPARLEGR
QNIEIRPKVD GFIDKIYIEE GAIVRKGQPL FSIHAPQYEQ EVKTATAAIR SAEAEMNLAR
MQVEKTGPLE KEGIISSYEL KSAEYTLHAR EATLAQAKAS LANAKNNVGY TQITSPVDGV
IGLIPYKTGS LVSSASPQAL TTVSDIGEMI AYFSWNEKQY LDFTYSAEGA QLRDKLKSIP
PVRLILANKQ EYALKGKIES VGGLINTTTG SIPVRASFQN PARLLRTGAS GLIRIPTHLK
DAILVPAKVT FELQEKTFVY TVKKDGTVQS TEIQILNTAP DGRYVVGQGL AGGEQVVTEG
LPSLKDGMRI RPVVK
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