| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5518 |
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| Symbol | |
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| ID | 8229133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6641517 |
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| End bp | 6646352 |
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| Gene Length | 4836 bp |
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| Protein Length | 1611 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644933365 |
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| Product | hypothetical protein |
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| Protein accession | YP_003089874 |
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| Protein GI | 255039253 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0704097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTAA AATATTTCTC CCGATATCGG GACTTTAACG GAAAAATCAG ACAAGTCAGA
TTCTCAAAGG AGGGTTTTGA TGGAACGCCT ATCGAGTGGA AAAACAGTCT TGGCGCGGTC
CGGTATACAT GGGGTTCGTC TGATTCTTTT TTCCCTGAAC AACCTATTGT TGCCGGTCAG
GCCCAAATCG CCCTCATTTT CGAGGAGCGA TACGACCTGT CCGATTTAGT GATCAACAGA
AAAAACTATT ATGTCGAAGT TCAGGAAGAA GATACCGGTG ATTTTATTTG GAGTGGATGG
TTAGAGCCTT GGGATGCCTC GCACAGCTAT CAAAAGCCAC CTTATCAGGT AAACATGACG
GCAAGTTGCG GACTCGCGCA TTTGTCTCGC AAGAAATACC TTACTCCTGA TAGCACTTTC
AAAAGATCCG GGCTTCAAAT AATCCGGGAT TGTCTCGGTA TAATTGGACG CGCAAACCTT
CCAATCCGGG TATCGGCGCA CATGCTGGAA AATGGATTTG ACGGTGATGA GATCCGTGGG
CTTGAATCGT TCGAAGAGAA CACCTTTCGG TATTTTGACC AGAACGGCGA GGCGATGTAT
TGTGACATTA TCGTCAATAA CATCCTTGAA CATTTTAATG CTGAGATTGT CCAGTATCGG
AATGTATGGA CAATTCGCGC AATCGTTGAT CATGCTACTG GCGCAGACAC TCGATTCTTT
AACCTTGGCG ACACGACAAT CATCGAAGAG TGGCCGCTGG AATATGTCAT TAATGCGGAT
CAGGCGAAAA GCTTGAATGG TGGGAATATC CGGACGTTAC CGCCAATTAA CAAGTATCGC
ACCGAGATTG ATTTCGGTCA GCAAAAGCCA TTCTTTGAGA ATGGTAACAT GCTCATTTGG
AATGATAGCG GCCTAGTAGG CTGGGACTTC TCTCACATGC CGAAAGGCAA TCCGGGTTGG
GAGCGGTACG AGATCGGCGC CGAGGTAAGC CGTGGAGTGC TCAAAATTAA TGGTAAGTCG
CCACAGCCAT ACCGGAAGAA GAAAAAGAAG AAGTTCGGCC AAATCTTGGT ACCGATTCTT
ACCGGTATGA TCGGGGCGAA CCTCAAAAAC ACTTACTACG ACGTAGAGCC GGCGCAATAC
ATTGAAAGCC CAGGCGGCAC GATTGGCAGA GGTGACAAAA GTGTTACGAT AACCTTCGAC
TACGAGACGG AGGCGTTCTC TTCCGACATT CTGATTTCCA TCCGTATTCC TCGAAGAAAC
TCGAATGGAA CTTACACTGA CTTTTGGGTT GATCCATCGA TGCATCCTGC ATTGGCTGGT
GCAGATAAAA GTACCGCCGG AGCGAGTGAA AATTTCAAAC TGATTCGGGT GGAGCCTGTC
GACCGTGGAG CTCTGACTGA TAAAGGGACA ATAGATGTCT CCGGCAATCC GAATTATCCT
GTTGCAAACT TTTCACCGGG TTCACAAAAT CAAAACTGGA CGTGGACAGT TGCGGGCGTT
CCTGATGGCG AATTTCGCCG TATTGGTGGC GCGAACGGCG TTATTGTGGA AAATGGGGAT
TTAATCATTG CCAGAGTAGC AAATCTTGGT GGTACCCAGG AAGAGGTAGG CGAGTTTTGG
GAGGTTGTCA GCCTCCGTAA CGATACCAAA CGAGGAACGT TTTCGTTGTC CGTGGCCCTG
AACACCATGT TTATTACTGG CCCTGGGCAG GAGTTCACCG GCGATAAGAT CTACGTCCGG
TTTTACAAAA TGGCCGACGA TGGGGGTAAG CCCGGCGACT GGTACAAAGT CTATAACTTG
GACGGAAAGC TAGCCGGATT TGTTGCGTCT GATGAGTCAT CAAAATATGC AACAACACTT
GAACGGGGCG ACGTGACCGA CGAGGAGGCG GCGACCATCA ATCTGATTTC CGGTGATTTT
ACGCCGTGGT ATGCTGGCGC ATGGACCCGG CCTGGTTCGA ATACGATGAC ATCTTCATGG
CGGCGGCGCC CGGCTCTTAG TGAGTCGATG AGTATCTACC GCGCGATGAT GAAGGATCGC
CTGTGCATGA CAACCAAATC ACTTTCGGTG GTTGAAGGCA AGACTCAGTT GGCGGGCGGC
CAACCAGACA TTCATTATCT GCACAAGCTG TATTTCGCTG ATCAGGACAA GCATTTCAGG
CAGGTGCGGT TTTCCTTCAC TGACGCTACA CGGGAGTTTG ATAGCACTTC TGTCGAGATC
AAGTACGAAG AGATTCCAGA CTCCGAATTA AAGCAGAATT CCTACATTCC AGGCTCACGC
ACGCTGAATA CCGTTCCTGG AATGGGAGAC GGTATCTATC CATCAAAAGA GGATAGTACA
AGCGGAAGGC TGAACGCGGA GGATATGCCG CTTACAGAAG AGGAGCTAAT TGAGCAAATC
GAAGCTACTG CGCGGCTCGA TGCCCTTTTT GAAAACATTA CGCCATTAAC GTACGTGGCC
GCTATTGAAA GCGAGGATTC GGTGGATTTG AAAGATTTCC TTTCTGAAAC GTTTGTTGCG
AACAATGAAA ATCAGGAAGA GGACGATTAT TTCGATATCA CAACCCTGGT TTTGAAGCTG
GCATTTGCGC CGCCTTGGTT TTCGACAGTT GAGGAAGATG AGCTCGTTGT TACGGCGACA
GCGCTCGCTC CGAAGTCAGG ACAGTATTAC ATTGATTTTA CGGCGACTGA TCCGGAAAGC
GGGTTCTCGG TGCCAATTCG TGTGCCTGTC CTGGTCGAGG AGAATGAAGA TTACGTCGAA
ACCTGGCCGC CGGAGTTTGA TCTATTTCCA GTGCTCAATT TTGTGCTGGA TAAGCCAACA
ACAACAGGCT TTGATTTTCG GGATTACATC ACCAGCGGGC ACAAAAAATT ACAGTACCGC
TTTTTCTCGG TGCCCGAATG GATTACGGCT CGCAGCGTTG TGAACGATGA TTTTTCGATC
ACAGGAACGC CGACCATTAT CGAAAAACGG AAAATCACGG TTGAAATCTG GGACGGCATT
GCCGAGCACC GGCCATACAC AGATGAGATC ACGCTGCAAG TCATTGAGGC GACCGAAATC
ACCGGAAAGC TGATCGGTTC AAAGGGTGGT GAAGCGGTGA CGGGAGATCT GCCAGGCGCA
TTTGAGGTTT TGGATAAATG GGATGCGCTG TTGACGGTAA CTGGCCTGCA TGACAAAATC
ACCATCAAAG TGACCGGCGG CGGAGACCTT GGAAACGAGG TGGACTTCGA AAATACGCTC
ACTCTACCTG ATCCGGTAGC GGCTGGCACG TATCGTCCGT TCATCGAAAC CGGAGGCGTG
GATGGAATCG TCGGCCAGTA TTCGATTGAG ATCACTGCAT TCCTGGGCGA GAATGAAACA
GCGCAATCTT TCGACTTGAT GCTCTACGAT GATGAGTACC TGGCTAAAAT GCGGAAGTAC
CTCACTAAGG GAGTGGACCG CGTGGGCGAG ATTATGCCAG ACGGCAGCAC GTCGTTCTTG
TACCCTGGGG AAGCGAACGT CCGGGCCGAG ATCCACGATA TCGACTTCGA CGAGATTTAC
ATTTCACTTG AAAAGGAAGG ATCTCTTGTC GGCGAGCAGC ACCTTACAGA TGTCGACCCC
ATTACAACGT GGTGGTTTTA TGCTCTGGAA GAAGATGCGG AGTTAAGCGC TGGCGTATAT
ACATTTCCGG TACGCCTTTT GAAGGATGGT GTGGAAGTTT TTAAACGCAC TGACAAGTTC
ACTATCGAGA GCAAGGATGC CGAGCCACTT CCGCTGCTTT CACTGGCGAC ATTTGCGGCC
GGGACTACAA ACGCCAACGA CCTGGCTGAG AATATTCCGT TGAAAGGCGC AGAATATGAT
TTGCCGTCAA ACTACACGGT CATTTTTAAC GGATTCGGCG GCGTCGCATA TTCTTTGGTA
GAAGCAAAGT TTGAGTTTTT GCGTGATGGA GGGTTTGCAG AAGTCGATAT TCAGCAATAC
ACTGGATACC CTCAAATAAC TACTTATCCG CAGCCAGTTA CATCAGGAAA AGTTCTTATA
TTTGGGAACA AATCATCTTT GAAAATCGGG GACATCCACC AGGCGCCATC GCGTGTCCGT
GCCACTTTTA ATGGCAAGGA TCAGGCGGGG AAGATTGTGG GTATTGCTCA GGCTGATTTC
AGCTTCCGCA TTGCTTTGGA CCCGGAAGAT TATAGCGGCT TCGCATTCTT CGAGGATGAT
ATCGCTTCGG GTGCGGGTAA CCTCATTGAC GGCAATATGC CTCGTGAAAA CCGCAAATAC
CTATTGCCGG CGACTGGCAA GACTTGGAGC GTCCGCAGAA AGTCATTCGA GGGAATGCCT
TTCGAATATG TGTCGGTTAC AGTTGGAAAG CGTGTATCTG GGGTTTGGCA GGACTATGGA
AACGTTATCT ACTTCCCCGA ACCTACTACC GGTGTGGATG ACTTTGAAAC CATACGGTCA
GAATGGGAGC TATCAGATAA TAGGCCAATT GTTAAAAACT CGGTTCAGCC CATCTATATA
GACGAGCCGG GCGAATACAG GGTGATAATG TCGATTAATG TCGAAGGGAT AAACCACGGA
AGGCAGACTA CTTTTGAATT GATCGAAGAT GTCGAGCCGC CAATTAAAGA CTGTTGCGCA
TGCGATTGCG AGGGTGAAGG CTCCGAGCAG ATCGAATATC CGTTCATGAC ACCCGCTGAG
GAGTGGATTG TCGCTCACAA CCTGAACAAG AAGCCCGATC CGTTGATCCT GATCGGCGGT
AAGAAGGTGC TCTCGGATGT GCAGTACCTG GATAATGACG TGTTTAAAGT GATTCACTCG
AAGCCGCAAA CCGGCTCGGT TATAATTATT TCATAA
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| Protein sequence | MGLKYFSRYR DFNGKIRQVR FSKEGFDGTP IEWKNSLGAV RYTWGSSDSF FPEQPIVAGQ
AQIALIFEER YDLSDLVINR KNYYVEVQEE DTGDFIWSGW LEPWDASHSY QKPPYQVNMT
ASCGLAHLSR KKYLTPDSTF KRSGLQIIRD CLGIIGRANL PIRVSAHMLE NGFDGDEIRG
LESFEENTFR YFDQNGEAMY CDIIVNNILE HFNAEIVQYR NVWTIRAIVD HATGADTRFF
NLGDTTIIEE WPLEYVINAD QAKSLNGGNI RTLPPINKYR TEIDFGQQKP FFENGNMLIW
NDSGLVGWDF SHMPKGNPGW ERYEIGAEVS RGVLKINGKS PQPYRKKKKK KFGQILVPIL
TGMIGANLKN TYYDVEPAQY IESPGGTIGR GDKSVTITFD YETEAFSSDI LISIRIPRRN
SNGTYTDFWV DPSMHPALAG ADKSTAGASE NFKLIRVEPV DRGALTDKGT IDVSGNPNYP
VANFSPGSQN QNWTWTVAGV PDGEFRRIGG ANGVIVENGD LIIARVANLG GTQEEVGEFW
EVVSLRNDTK RGTFSLSVAL NTMFITGPGQ EFTGDKIYVR FYKMADDGGK PGDWYKVYNL
DGKLAGFVAS DESSKYATTL ERGDVTDEEA ATINLISGDF TPWYAGAWTR PGSNTMTSSW
RRRPALSESM SIYRAMMKDR LCMTTKSLSV VEGKTQLAGG QPDIHYLHKL YFADQDKHFR
QVRFSFTDAT REFDSTSVEI KYEEIPDSEL KQNSYIPGSR TLNTVPGMGD GIYPSKEDST
SGRLNAEDMP LTEEELIEQI EATARLDALF ENITPLTYVA AIESEDSVDL KDFLSETFVA
NNENQEEDDY FDITTLVLKL AFAPPWFSTV EEDELVVTAT ALAPKSGQYY IDFTATDPES
GFSVPIRVPV LVEENEDYVE TWPPEFDLFP VLNFVLDKPT TTGFDFRDYI TSGHKKLQYR
FFSVPEWITA RSVVNDDFSI TGTPTIIEKR KITVEIWDGI AEHRPYTDEI TLQVIEATEI
TGKLIGSKGG EAVTGDLPGA FEVLDKWDAL LTVTGLHDKI TIKVTGGGDL GNEVDFENTL
TLPDPVAAGT YRPFIETGGV DGIVGQYSIE ITAFLGENET AQSFDLMLYD DEYLAKMRKY
LTKGVDRVGE IMPDGSTSFL YPGEANVRAE IHDIDFDEIY ISLEKEGSLV GEQHLTDVDP
ITTWWFYALE EDAELSAGVY TFPVRLLKDG VEVFKRTDKF TIESKDAEPL PLLSLATFAA
GTTNANDLAE NIPLKGAEYD LPSNYTVIFN GFGGVAYSLV EAKFEFLRDG GFAEVDIQQY
TGYPQITTYP QPVTSGKVLI FGNKSSLKIG DIHQAPSRVR ATFNGKDQAG KIVGIAQADF
SFRIALDPED YSGFAFFEDD IASGAGNLID GNMPRENRKY LLPATGKTWS VRRKSFEGMP
FEYVSVTVGK RVSGVWQDYG NVIYFPEPTT GVDDFETIRS EWELSDNRPI VKNSVQPIYI
DEPGEYRVIM SINVEGINHG RQTTFELIED VEPPIKDCCA CDCEGEGSEQ IEYPFMTPAE
EWIVAHNLNK KPDPLILIGG KKVLSDVQYL DNDVFKVIHS KPQTGSVIII S
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