Gene Dfer_5443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5443 
Symbol 
ID8229054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6567068 
End bp6568057 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content59% 
IMG OID644933287 
Producthypothetical protein 
Protein accessionYP_003089800 
Protein GI255039179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.711139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.362877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC TTAACCTTGA AATCCTCAAT CCCGGCCCGA TCCTGGCCGA CCTGAAAACC 
AAGCTCCGGG CCCTGGCCGA ATCGCCGCAT TTCTACCTGC GGCGGCAGGC GAATGTCCGT
CATGATGCGG AGCCGCATAT CAATGAGCTC GGTATCCGGG AGTCGTCGCT GCCTGCTATC
CTGCAAATGA TCGGTATCCG CAGCGTAACG CTCAATGCCC CGCAAGACCT GATGCCGCTC
CACCGGCTGA TCGACGACAT TCCCCCCGCG GCCGCCGACC ACGAGCAATG GCGCTACCTC
ACATGCGACG CGGTGATGCA GGTGTTACAG CCCTTCCTGG CCAACTGCCG CACGATCGCT
TTCCAGGACT GGGCGGGGCT GTCGGGCGCT TCGGAGCTGT GGAGCAGCCT GCTGCGCGGC
GTGATCCGGC CAGGCGGTAG GCAGGCGCTG GAATTCATAT TCTACCTGGG CGACCCGCTT
TCGAGGCGGT CGTTTCAGGT GGAAGAGGTT CTGGATATTA TCGGTGAGTT TTCACAGCAC
GGCCAGGTAA CCGTCGCGCT GGACGAAGAG GAGGCCATTA AGCTGTGGAT GGTGCTCAAT
GGCGTGCATG AGTACAGCAG CGTCACCGGC CAGGTGTTTC CCGATTTGAA AAGAAAATAC
ATTTCCATAT TCCGGACCAT CCTCGTGGAC AGGCTGCTGG TGTACTCGGC CACGCAGGCG
ATGATCTTCA CCCGGCAGGC ACAATTGCTG CTGGCCCGCA AAAAAGTGGC GTCGTCGTTC
GAGATAGCAC CCGAGGCACG CGAAAGTTTC ATTGATGGTT TCTGCATCGG GCTGGTGCGT
CAGCTGGACA TCGTCCGTTG CCTCGCATTA GGCCTCATCG TGTTTGGCTC CCGCAGCGAA
ACGGGTGAAA AGCAGCCCGG ACTCGTTTCG TATATCGATC GCTGGCAGGA GGACTTGCAA
CAGCAGGAAA TCATGTATCT TTACCAGTAA
 
Protein sequence
METLNLEILN PGPILADLKT KLRALAESPH FYLRRQANVR HDAEPHINEL GIRESSLPAI 
LQMIGIRSVT LNAPQDLMPL HRLIDDIPPA AADHEQWRYL TCDAVMQVLQ PFLANCRTIA
FQDWAGLSGA SELWSSLLRG VIRPGGRQAL EFIFYLGDPL SRRSFQVEEV LDIIGEFSQH
GQVTVALDEE EAIKLWMVLN GVHEYSSVTG QVFPDLKRKY ISIFRTILVD RLLVYSATQA
MIFTRQAQLL LARKKVASSF EIAPEARESF IDGFCIGLVR QLDIVRCLAL GLIVFGSRSE
TGEKQPGLVS YIDRWQEDLQ QQEIMYLYQ