| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5424 |
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| Symbol | |
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| ID | 8229035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6546939 |
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| End bp | 6549350 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933269 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003089782 |
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| Protein GI | 255039161 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00458607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0384423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAA ACTACTTTAA GATTGCTTTC AGAGGTTTTC GGAGAAACAA AGTTTACACG
TTGATAAACG TATCGGGCCT GGCGATTTCG CTGGCTGCCT CCCTGCTCAT TGCCTTGTGG
GTGTGGGATG AATGGAACTT CAATAAAAGC AATGAAAACT ACACGCGTGT AGCGGGTGTG
ATGTCGCATA TTGCGCAAAA CGGGCAGGTT GTGAGCTCGC CGAATATGCC TTTTCCACTA
GCCGCCGAGC TCCGCGAGAA TTTCCGGGCT GACTTCGAAC ATGTAGCCAT ATCCTGGAAC
ACCGAGGATT ACACCCTGAC TGCGAACGGG AACAAGTTCC GGAAAAAAGG TCGGTTTATG
GAGCCCGACG GTGCCCAAAT ACTGCCCCTC GAAATGGTAA GCGGCGCCGC CAGCCTTGCC
AGCCCTTCTC AGCTATTACT GTCGGAATCC GCCGCGACGT CGATCTTCGG CACGCGCGAG
CCAATCGGGC AATTGGTAAA AATAGATCAG GAACTGGAAG CAATGGTAGC CGGAGTTTAC
CGCGACTTCC CTCCCAACTC GGATTACTAC AACCTGTCGT TCATCGCGCC CTGGAAAATG
TTCACCGCTG CGCGCAGGAG GCAGTGGGTC AATGAGGTAA AAGATAACTG GAACATCAGC
ACATTTGAAA TACTGGTTCA AACCCGCGAA AGCAGCAATC CCGAAGCGGC TTCGGAAAAA
ATTAAGCACT TATTACAGAA CCACTTAAAA GCCGGCGCCA GCACAACTGG CCCGTCGGCG
CTTATTTCCC TGCACCCCAT GTCGCGCTGG CATTTGTATG CTTCGTGGGA AAATGGCGTG
GATACCGGCG GTGATATTTA TTATGTGAAA CTGTTCATGG CAATCGCGGT TTTTATCGTG
CTCCTGGCCT GTATCAATTT CATGAACCTC ACCACCGCCC GCTCCGAGCA GCGCGCCCGG
GAAATCGGCG TTCGAAAAGT GGTGGGTTCC AAGCGGGCCC AGCTCATCGG GCAATTCATG
TTTGAGTCCT TCGTCGTGGT AGGGACATCG CTGCTGATCG CGCTGTTGCT CGTCCAACTG
GCATTGCCGG AATTCAATGC GGTCACCAAG AAACATATCA CCTTCATCTC GCCGGACGAT
CTGGCATTCA ACCCTTATGT CGTAGCGCTC GGTATCGGGT TTTGTTTGCT CGTAAGCTTC
GTGGCCGGTA GTTACCCGGC GCTTTACCTT TCTTCCATCA AGCCGGTGAG CATATTGAAA
TCCGGCGCAG GGGGCAGGCT GTCATCCCGA CCGAGAAAGG CATTGGTGGT ACTGCAATTT
ACCATCTCAA TTTCCCTCAT TATCGCCGCT GCCGGGGTTT TTCGGCAAAT GCAATTCGGG
CAAAGCCGTC AAACCGGGTA CGACAAACGC GGCCTCGTAT ATGTAAAAAT CCCGCCGGGC
ACCGCGCGGC TCGATGCATT GAAGAACGAT TTGCTGCATT CCGGCATCGC GTCGTCGGTG
GCGCAATCGT CCGGACCCGT CACGGATATG CTCTCAAATG CACGGGGCTT TTCCTGGCCC
GGCAAGTCAC CCGGACAGCG CGAGGAATTC GCCGTCATCG CCGCGTCGCA CAGTTATGGA
AAGACGGTCG GCTGGCAGGT GGTTCAGGGA AGGGATTTTT CGGAGGAGTT CATTTCAGAC
TCATCGGCGA TCATCATCAA CCAATCGGCG GCCAAATACA TGGGCCTGGA CCAGCCGGTG
GGTAAAACCG TTCGCTGGAA AGACGGGACG TTCAACGATT CGGAATACCA CATCGTGGGT
GTGGTGCGGG ATATGGTCAT GCAATCCCCT TACGAGCCGG TTAAGCAAGC CATTTATTTC
ATGACCTACG CGCCTAATTA TTTGTATATC AAAGTAAAAG ATGATGTCAA AACAAGCAGC
GTTCTCCCGA AACTCAACCT ACTGTTCGAC AAGCATTTAC CCGGAAACAT CTTCGACTTC
CAGTTCGCCG ACCAGCAATA TGGTTTGAAA TTCGAAACGG AGGACCGTAC GGGCAAACTA
ACGCTCCTAT TCGCCGCCGT GGCCATTTTC ACGTCCTGCC TGGGGCTATT CGGCCTGGCC
GCATTCACCG CCGAACAACG GCGAAGCGAA ATCGGCATTC GAAAAGTGCT CGGCGCCTCC
GTAACCAGCG TCTGGCAGCT CATCGCCCGC GATTTCGTGT ACCTGACCAT CTTCGCCATC
GCGCTCGCAA CGCCGGTAAG CTACTATTTC CTCACCGAAA CGCTGGAAAA ATACCACTAC
CGCTCCACCA TTCCCTGGTG GCTTTTCGCA GGAGCCGGCG CCCTCGCGCT ATCGCTCACG
CTGCTTACGG TCAGCTACCA GGCTATCAAA GCCGCGCTGA CGAATCCGGT GGAAGCGCTT
CGTTCGGAGT AA
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| Protein sequence | MIKNYFKIAF RGFRRNKVYT LINVSGLAIS LAASLLIALW VWDEWNFNKS NENYTRVAGV
MSHIAQNGQV VSSPNMPFPL AAELRENFRA DFEHVAISWN TEDYTLTANG NKFRKKGRFM
EPDGAQILPL EMVSGAASLA SPSQLLLSES AATSIFGTRE PIGQLVKIDQ ELEAMVAGVY
RDFPPNSDYY NLSFIAPWKM FTAARRRQWV NEVKDNWNIS TFEILVQTRE SSNPEAASEK
IKHLLQNHLK AGASTTGPSA LISLHPMSRW HLYASWENGV DTGGDIYYVK LFMAIAVFIV
LLACINFMNL TTARSEQRAR EIGVRKVVGS KRAQLIGQFM FESFVVVGTS LLIALLLVQL
ALPEFNAVTK KHITFISPDD LAFNPYVVAL GIGFCLLVSF VAGSYPALYL SSIKPVSILK
SGAGGRLSSR PRKALVVLQF TISISLIIAA AGVFRQMQFG QSRQTGYDKR GLVYVKIPPG
TARLDALKND LLHSGIASSV AQSSGPVTDM LSNARGFSWP GKSPGQREEF AVIAASHSYG
KTVGWQVVQG RDFSEEFISD SSAIIINQSA AKYMGLDQPV GKTVRWKDGT FNDSEYHIVG
VVRDMVMQSP YEPVKQAIYF MTYAPNYLYI KVKDDVKTSS VLPKLNLLFD KHLPGNIFDF
QFADQQYGLK FETEDRTGKL TLLFAAVAIF TSCLGLFGLA AFTAEQRRSE IGIRKVLGAS
VTSVWQLIAR DFVYLTIFAI ALATPVSYYF LTETLEKYHY RSTIPWWLFA GAGALALSLT
LLTVSYQAIK AALTNPVEAL RSE
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