| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5368 |
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| Symbol | |
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| ID | 8228979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6490056 |
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| End bp | 6491900 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644933213 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003089726 |
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| Protein GI | 255039105 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1239] Mg-chelatase subunit ChlI |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAGA ACTTGTACCC GTTTGCCGCG ATCGTCGGGC AGGATGAACT GAAAAAGGCA
TTGCTGCTCT GCGCCGTCAA TCCGGGCATT GGCGGGGTGC TGATCAAAGG CGAAAAAGGC
ACGGCTAAAA GTACTGTGGT GCGCGGACTG GCGGCGATAA TGCCCCCGCA GCCTCTCAGC
GGCGAACCGG TGCCGTTTGT GGACATGCCG CTGGGCGCTT CCGAAGACCG TGTGCTGGGA
AGTCTGGATA TTGAGGCTGT TCTTTCCAGC AAAACGCGCA AACTGCTCCC CGGGCTGCTC
GCTAGTGCGC ACGAGGGTAT TTTATATATC GATGAAGTGA ACCTCCTGGC CGATCACCTG
GTGGATGTGC TGCTGGATGT GGCAGCTTCG GGCACGAATA CCGTGCAGCG GGAGGGGCTG
TCGGTGAGCC ATCCAGCGAA GTTTGTGCTG ATCGGTACGA TGAACCCCGA GGAAGGCAAT
CTGCGACCGC AGTTTCTCGA CCGGTTCGGA TTGATGGTGG AAGTAGGCGC ACCTGCCGAC
GTGCAGGCAA GGACGGAAGT GGTGCGAAGA CGGATCGCTT TTGAGCGTAA TCCGGAAGGT
TTTGTTAATC AATGGATTGA CAATCAAGAA ATTATTAAAG CGCAGATTAG CAGGGCAATG
CAGCTGCTGC CACTGGTGCA AATGCCGGAC GGATTGCTGA AAATGATCAG CCAGCTCTGC
ATTGAATGGG GCGTGAGCAG TCTCCGGGCG GATATTGTGC TATACAAAAC GGCCGTCACA
ATGGCAGCGC TGCACGGTCG GACGCTCGTC ACACCGGACG ACATCCGCGA GTCGGCCACG
CTCGTGCTCA CGCACCGGAA GGGCAAAAAA GCACTATCCC CCAATAGCCA GCAACCCAAT
GAACGCCCGG CGAGCGGCGA CGAAAACCCA CAAAATCAAA AAAGCCAGAC ACCCGAAGCA
CCTGATAAAA CACAAAACGG GCAACAAGAC GGTGAATGCG GTGAAGGAAA TTGTGAAAGC
GAGGGTAGCG AACGCATCGC GAATATTGAT TTTGGAATGA CCGTACCAGA ATTGACGAAG
AAGCCCGCTA GCGCCGCTCC GGATGTGGCA AACGGACGGG ATGTACGCGC TCGTCAGACC
GCAAAAGGTG CTGCGATCAG GGCGGTAAGG AGTGAAACAG CGAGCGATAT CGCCATGACG
GACACCATCC TGCACGCCCT TACACGCAAC CCGGACGATC TCACAATCGG CAAAGCGGAT
TTGCACCAGA AAGTCCGTAG CGGAAAGGCA GGGCGGCTGA TACTTTTCGT CGTGGATTCG
TCGGGTTCGA TGGCGGCGGG CAAACGCATG GAAGCCGTAA AAGGCAGCGT AATGAAGCTC
CTGGAAGATG CTTATCAAAA GCGTAACATG GTGGCGGTGA TTGCCTTCCG GGGTGTGGAA
GCGACAGTTT TGCTCGAACC TACCCGCAGC ACCGGCCTGG CTGAGCAGGC ATTGGAGCAA
CTCCCGACCG GCGGCCGTAC GCCCCTGCCG CATGCATTGG AAATGGCGGA GAAAATGCTC
GCATCGTTTG CAGGACGCGA TACGATGGAG CCCTTGCTGG TAATCCTGAG CGACGGCAAA
GCCAATGTAC CTCTGCCCGG CTCGGGTGGC GATGCATGGC GGCAGTCGCT GCAACTGGCT
CAAAATCTGC ATTGTGACGC ACTCGTGCTT GACACCGAGA GCGGCTATGT ACGCTACGGG
AAAGCGCGGG AGCTGGCCAC GGCGCTGGGC GCGGAGTACC GGTCGTTGCA GGAGCTTTCG
GCTGATGAAA TTACAGATAC TATTGCAAAG CGGATCGTTA TTTGA
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| Protein sequence | MEKNLYPFAA IVGQDELKKA LLLCAVNPGI GGVLIKGEKG TAKSTVVRGL AAIMPPQPLS
GEPVPFVDMP LGASEDRVLG SLDIEAVLSS KTRKLLPGLL ASAHEGILYI DEVNLLADHL
VDVLLDVAAS GTNTVQREGL SVSHPAKFVL IGTMNPEEGN LRPQFLDRFG LMVEVGAPAD
VQARTEVVRR RIAFERNPEG FVNQWIDNQE IIKAQISRAM QLLPLVQMPD GLLKMISQLC
IEWGVSSLRA DIVLYKTAVT MAALHGRTLV TPDDIRESAT LVLTHRKGKK ALSPNSQQPN
ERPASGDENP QNQKSQTPEA PDKTQNGQQD GECGEGNCES EGSERIANID FGMTVPELTK
KPASAAPDVA NGRDVRARQT AKGAAIRAVR SETASDIAMT DTILHALTRN PDDLTIGKAD
LHQKVRSGKA GRLILFVVDS SGSMAAGKRM EAVKGSVMKL LEDAYQKRNM VAVIAFRGVE
ATVLLEPTRS TGLAEQALEQ LPTGGRTPLP HALEMAEKML ASFAGRDTME PLLVILSDGK
ANVPLPGSGG DAWRQSLQLA QNLHCDALVL DTESGYVRYG KARELATALG AEYRSLQELS
ADEITDTIAK RIVI
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