| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5357 |
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| Symbol | |
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| ID | 8228968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6474442 |
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| End bp | 6475677 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933202 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003089715 |
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| Protein GI | 255039094 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC CGGACCTGAT TCCGCATTTA TTCCGAACCG AATACCGGAA GATTACCGCC
GTGCTCAGCA AAACGTTCGG TCTCGAACAC ATTGAAACCG CCCAGGACAT AGCCAGCGAT
ACCTTTTTGC AGGCTTCCGA AATGTGGGGC ATCAAAGGTG TGCCCGACAA TCCCGTAGGG
TGGCTGTACA CCGTTGCACG TAACAAAACG CTCGATTACC TGCGGCGTGA CAAGCTGTTT
CGGGAAAAAA TCAGCGGCCA GGTAGTGCGG GACAGTCCCG GGGCCGACGA GCTGGAAATT
GATTTATCCG CGCAAAACAT TACCGACAGC CAGTTACAGA TGATGTTCGC CATTTGCCAT
CCGTCGCTTC CGGTGGAATC GCAGATCGGG CTGGCGCTGA ATGTGCTTTG CGCGTTTGGT
ATCAACGAAA TCGCCAGCGC CTTCCTTACC AGCAAGGAGA CGATCAATAA GCGGCTTTAC
CGGGCGCGGG AGAAACTGAG GGCCGAACAG GTGAAAATGG AGTTTCCGGA CGAAACCGAG
ATCGAGCAGC GGCTGGAAGC GGTTTTGAAG ACGTTGTACC TGCTTTTTAA TGAAGGATAT
TACTCGGCGG GAAAGGACAT TACGCTGCGA AAGGACGTTT GCATTGAAGC CATGTGGCTC
ACCAAAATGC TGATCGAAAA CCCGGGTACC GACAGGCCGC AGGTGAATGC ATTGCTCGCC
CTCATGTGCT TCCACGCCTC ACGGTTCGAG GCGCGTACGA ACCCGGCCGG CGAAACGGTG
CTGTACCAGG ACCAGGACGA CCGGCTTTGG GACACGGCGC TCATCAGTCG CGGCGAACAT
TACCTCAACC GCGCCTCCGT AGGTTCGCAG CTCTCGCGTT ACCACCTCGA AGCGGCCATT
GGTTACTGGC ACACGATCAA GGCCGATACA ACGGAGAAAT GGGAGCACAT TCTTCAATAT
TACAACCATT TACTCATCCT CGAATACTCG CCCATTGCCG CGCTGAACCG CACCTACGCC
CTGGCCAAAG CCCGCTCGAA AGCCGAAGCG ATCCGCGAGG CGGAAAAGCT CAACCTGGAA
GGCAACCATT TGTATCATTC ATTGCTGGGA GAACTGTATT CGGGGATTAA TGACGCGCAG
GCGCTGGATC ATTTCAAAAC TTCGCTATCG CTTGCAAAAT CCCGCGCCGA CAGACAGTTG
CTCACAGAAA AGATTCGCAA ACTAAGGGAA GCATAA
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| Protein sequence | MKNPDLIPHL FRTEYRKITA VLSKTFGLEH IETAQDIASD TFLQASEMWG IKGVPDNPVG
WLYTVARNKT LDYLRRDKLF REKISGQVVR DSPGADELEI DLSAQNITDS QLQMMFAICH
PSLPVESQIG LALNVLCAFG INEIASAFLT SKETINKRLY RAREKLRAEQ VKMEFPDETE
IEQRLEAVLK TLYLLFNEGY YSAGKDITLR KDVCIEAMWL TKMLIENPGT DRPQVNALLA
LMCFHASRFE ARTNPAGETV LYQDQDDRLW DTALISRGEH YLNRASVGSQ LSRYHLEAAI
GYWHTIKADT TEKWEHILQY YNHLLILEYS PIAALNRTYA LAKARSKAEA IREAEKLNLE
GNHLYHSLLG ELYSGINDAQ ALDHFKTSLS LAKSRADRQL LTEKIRKLRE A
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