Gene Dfer_5286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5286 
Symbol 
ID8228897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6377681 
End bp6378976 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content52% 
IMG OID644933131 
ProductChloride channel core 
Protein accessionYP_003089644 
Protein GI255039023 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCTA GTTCTTACAA GGTTAAAAAA ATTAAAAGAG TGTTTGCGGT GATCCTGGCC 
GCCGCCGTTA CAGGCATCTT TTCCGCCCTC GTGGCCGATA CGCTCAAAGT CATCACCGAA
CATTATGAAG AGGCATTTCT CGAAAACCTC CGGCATAACC GATATCTGAT CTTCATTATT
CCCCTCATTG GTCTCACAAC CATTCACCTG CTGCGCCATT TCCTGTTTCG CAACAAGGCC
AACAAGGGTA TCAAGGAGGT GCTTGACACC ATTAATAAAA ATGCCCACAC GCTTCCGGCA
TACAAAATTC CTTCCCATTA TTTCAATGGC CTGCTGACGG TGATTTTCGG CGGTTCCACG
GGCATTGAAG TGTCCACGGT AGTTTCCACG GCGGCAATCG GAGCATTGTC GAGCCGCAAG
GTGAGTTACT TGCGCAACTA CCGCACCGAC CTCGTGTGTG CGGGCCTCGC GGCAGGGGTG
ACGGCCCTTT TTAATGCGCC TGTCGCTGGT TTCCTGTTTG CATTCGAGGT TTTTACGAAA
CGGAAAAGCA AGTTGCACAC GGCAGCGGTG GTCACGGCGG TGCTTTCGTC GTATCTCGTC
ACACGGTTTT TCTTCTATAA GCAAGTCTTT CATTTCAGCG TCACCAATTG GCGCACCGAG
GCATTGCCTT ACATCGTATT GCTGGGCGTG ATTGCCGGGT TCAATTCGGT GTACCTGACT
AAATGTGTGC TGTTTTTCAA AAAGTTTTTT GGCTCACTGA AAAACGATTA CGTCCGCATT
ATCGGCGGGT CGCTGCTGAT CTCGACGCTC ATTTTCTTCG TGCCTAATTT GTACGGAGAA
GGTTACGATG GCATTAAGCA CGTATTCCAG CACGCCACGG CGCCGTCGCT GGCGGTGATC
CTTCCGTTGC TTGTGGTGGT GCTCTTGAAG CCGGTAGCCA CTTCCGTTAC GCTCGGGGCG
GGAGGCGATG GCGGTGTTTT TGCGCCCAGC CTGTTCATCG GAGCGTTCCT GGGGCTGATC
GTTTGTGTGG TATTGAACCA CTTTTTCGGG CTCGGGCTGA TCCCCGTTAA CTTCGTACTG
ATCGGCATGG CCGCCGTGCT TAGCGGAAGC ATTCATGCGC CGTTCACGTC CATTTTCCTG
GTGTGCGCGC TGGCGGATAA TTACGTCCTG TTCATCCCGA TCGTCGTGGC GAGCCTGGTG
TCGAAATGGG TAGCCGCCGC TATTTTTCCG TATTCGGTTT ATACTTATCA GGTTAAACAC
GCGCAGGCGT CTATTGCTCC GCAACAACGG CCATAA
 
Protein sequence
MDSSSYKVKK IKRVFAVILA AAVTGIFSAL VADTLKVITE HYEEAFLENL RHNRYLIFII 
PLIGLTTIHL LRHFLFRNKA NKGIKEVLDT INKNAHTLPA YKIPSHYFNG LLTVIFGGST
GIEVSTVVST AAIGALSSRK VSYLRNYRTD LVCAGLAAGV TALFNAPVAG FLFAFEVFTK
RKSKLHTAAV VTAVLSSYLV TRFFFYKQVF HFSVTNWRTE ALPYIVLLGV IAGFNSVYLT
KCVLFFKKFF GSLKNDYVRI IGGSLLISTL IFFVPNLYGE GYDGIKHVFQ HATAPSLAVI
LPLLVVVLLK PVATSVTLGA GGDGGVFAPS LFIGAFLGLI VCVVLNHFFG LGLIPVNFVL
IGMAAVLSGS IHAPFTSIFL VCALADNYVL FIPIVVASLV SKWVAAAIFP YSVYTYQVKH
AQASIAPQQR P