| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5257 |
|---|
| Symbol | |
|---|
| ID | 8228868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6339982 |
|---|
| End bp | 6341349 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644933103 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_003089616 |
|---|
| Protein GI | 255038995 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAA ATACTGACAT TATGAATGCA ACATGGCCGA AGTCATCGGA AATACTGAAA
AATAACGAAC AATGGATTCC CGGCGGCGTG GTATCGCTCA ACCGGAAGTC CGACCCGAAT
ATATGTTTTA CCAAAGGCGT GGGAAGCCAC GTGTGGGACC TCGAAGGCAA CAGATACATC
GACTACCAGG CCGGTTTCGC AGCTTCTTTC CTCGGACACA ACGATCCCGA CGTGAATGCG
GCCGTAATGC AGACGCTCCA AGACGACAGC GTGCTCATGG GCGCCGGGCC GACGGACCTG
GAAGGCCGGT TTGCGGAGCT GTTCTGCCGG TCGGTGCCCA CGGTGGAAAG CATCCAGATC
ACCACCACAG GCTCCGAAGC GACCTACCAC GCTATTCGTA TAGCCAGGGG AGTTACCGGG
CGCAACCACA TTATCGTGAT GCAGGGCGGC TATAACGGCT GGCATAACGA CGTCGCCTGC
AACGTGATCA GCGCGCTCGC CGACGTGGGT GAGCGGGTGA GCCCGGGCGA GTATCCGTTC
GATTCACTGT CGGCAGGCAT TCCCGACGAG CACAAGTCGC TGGTGCATGT GATCAACTAC
AACGACCTTG ATTCGGTGCG GCACATCGTG AAAAACTTCC CCGTCGCCTG CATCCTGCTC
GAACCGATCC TGCAAAATAT CGGTATCGTG AAGCCGCTGC CCGGTTACCT GCCGGAGCTG
CGCAAACTGG CCGATGAAGA AGGCTTTTTA TTAATATTTG ATGAAGTAAA AACCGGTTTC
CGCCACGCAT TGGGCGGCTA CCAGAGCATT TGCGGCGTCC AGCCCGACCT GAGCACGTTC
GGAAAAGCGG TAGCGAATGG CTATCCACTG GGGGTGATTG GCGGAAAGAA AAAGTATATG
GATTATTTTG TTCACCCCGA AAAATCAAAA AGGGTGCTGA TCGCGGGTAC ATTCAATGCA
TTTCCGCTCA CTACTGCTGC CGCCATTGCA ACGCTGGAAA AACTGGCTTC GCCGGAACAT
AATGTGTATG AGCACGTTAA CCAGCTCGGA CAGGTATTGG AAGACGGGCT GCATTCCATC
TTTTCGGGAA TGGACAAGCC TTTTCATGTA GCCCGGCAGG GGTCGGCATT TTGCGTGTAC
TTTATGGACC ACGCGCCGAT GGATTTTCAT GACATTCTTA AAAACCACGA TTTCGGGTTT
GATAAAACAT ACCGCCTGAA ACTGATTGAA CAGGGAATCT TCAATTTTCC CCTCCCTATT
AAGCAAGGCA GCATTTCATT TGCCCACACG TTACAGGACA TTGAAGAAAC ACTTGAAAAA
ACCGAGGACG TAGTGCAGCG CCTTTTGCAG AAAAGCCCGG TCCTGTAA
|
|---|
| Protein sequence | MILNTDIMNA TWPKSSEILK NNEQWIPGGV VSLNRKSDPN ICFTKGVGSH VWDLEGNRYI
DYQAGFAASF LGHNDPDVNA AVMQTLQDDS VLMGAGPTDL EGRFAELFCR SVPTVESIQI
TTTGSEATYH AIRIARGVTG RNHIIVMQGG YNGWHNDVAC NVISALADVG ERVSPGEYPF
DSLSAGIPDE HKSLVHVINY NDLDSVRHIV KNFPVACILL EPILQNIGIV KPLPGYLPEL
RKLADEEGFL LIFDEVKTGF RHALGGYQSI CGVQPDLSTF GKAVANGYPL GVIGGKKKYM
DYFVHPEKSK RVLIAGTFNA FPLTTAAAIA TLEKLASPEH NVYEHVNQLG QVLEDGLHSI
FSGMDKPFHV ARQGSAFCVY FMDHAPMDFH DILKNHDFGF DKTYRLKLIE QGIFNFPLPI
KQGSISFAHT LQDIEETLEK TEDVVQRLLQ KSPVL
|
|---|
| |