Gene Dfer_5251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5251 
Symbol 
ID8228862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6333079 
End bp6334137 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content46% 
IMG OID644933097 
Producthypothetical protein 
Protein accessionYP_003089610 
Protein GI255038989 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAA ATCAGGACTT TACGCCACGT GCAACTCCCT TCAACGAATT TAATTCGGAG 
GAAGTACAGG AGATCATCAG CCGCCCGCCG AATTGGCTGA TAAGCTGGGG CATTACATTG
TTTTTTGGAG TAATGGTGTT GTTAGGATTA GGGACATGGC TGATCCGCTA TCCGGATACT
ATTACCGCAC CATTTACACT CATAGCAACC GAGGCTCCGC GGGCAATTGT GGCGCAAACC
GAAGGTGAAC TAACTAAGCT TTTTGTCAAG AATGGACAAC AGGTTTTGAA GGGTCAAACG
GTTGCTTATC TAGAAAGCGC GGGCGATCAT GAGCAGATCA TAAAGTTGGA AAAGGAAATG
GAACAGATCA GTCATGCGAT TTCAAATAAT CGCTGGGATT CGGTCCGGCA TTTTCCGATC
GTTTCTTACA AGCAATTGGG TGAGTTACAA AATGACTTTC AATTTTTTAA TCAAAAACTT
ACCGGATTGA AATCCTTTCT TGTAGGTGGA ATTTATTATC AAAAGCAAAA AGGGGAAATA
CTTGGAGTTG AGAATGCTAT TGAGGAACGC AAAATTGACT TTTTGCAATC ATTGCATGCA
TTGTGCAATA GCATCGATCG TTGGCGGCAG AAATACATTC TTACGGCGCC AGTCGCTGGA
AAAGTATCTT TCTCAATGCC ATGCCACGAG GAACAATATC TAATCGCAGG CCAGGAGCTT
ATGACGGTGG GGCCGACAAT TAATTCATTC CAGGGGATTG TTAAAATCCC GCAACCAAAC
ATCGGCAAAT TGAAGGAAGG GCAGACAGTT TTGATTAAAC TGGACGGATT TCCACACCGG
GAATATGGCA TGGTGGAAGG CAAATTGGCC CAACTTTCGA ATTCACCCGG GAAAGATGAT
AGCTACTGGG GATATATCGA ATTGCCTGAC AAACTGAAAA CGCGCTACGG GCATACGCTA
TCCTACCGAA ACGGCCTGAA AGGCCAGGCC GAAATCATTA CGGCTGACAG GCGACTGGCG
GAAAGGCTGC TATCCACGAT TCGGGTCGGA GGGAAGTGA
 
Protein sequence
MPQNQDFTPR ATPFNEFNSE EVQEIISRPP NWLISWGITL FFGVMVLLGL GTWLIRYPDT 
ITAPFTLIAT EAPRAIVAQT EGELTKLFVK NGQQVLKGQT VAYLESAGDH EQIIKLEKEM
EQISHAISNN RWDSVRHFPI VSYKQLGELQ NDFQFFNQKL TGLKSFLVGG IYYQKQKGEI
LGVENAIEER KIDFLQSLHA LCNSIDRWRQ KYILTAPVAG KVSFSMPCHE EQYLIAGQEL
MTVGPTINSF QGIVKIPQPN IGKLKEGQTV LIKLDGFPHR EYGMVEGKLA QLSNSPGKDD
SYWGYIELPD KLKTRYGHTL SYRNGLKGQA EIITADRRLA ERLLSTIRVG GK