| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5222 |
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| Symbol | |
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| ID | 8228833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6292775 |
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| End bp | 6295762 |
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| Gene Length | 2988 bp |
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| Protein Length | 995 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933072 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_003089585 |
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| Protein GI | 255038964 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.276942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGAA CAGTTGCTGT TGGCATGAAG TCAAGATCTG CAGCGATAGC TGGAACCTGG
CCAAGATCCT TCCGCTTTGC CGCCCAAGAA TATGATGCAC AGGGAAAGCC AATTGGAGAT
CGTAAGGGTT TGAGGCCGCC ACAACTTGGG GCTTTATACG CTATTGGATC TCATTGGACT
CAAAATAGTA GTATCGCCAC TGTAGTTATG CCGACCGGAA CTGGAAAGAC CGAAACAATG
CTATCAGCAT TGGCGGCATT CCCGCGCGGC CCGATGGTAG TCGCTGTCCC CTCTAAGGCG
TTACGGAATC AGACGACCCG AAAATTCTTA ACATTCGGGT TGTTACGAAA GTTGACGTTG
CTACCAGAAG AAGTTGAAAA TCCCATCGTT GGCTTGTTGT CAAAGCAGCC GGGTGGCGAG
AACGACTTGG CTATTTTTGA GGATTGCAAT GTTGTTGTAT CCGCGATGGC ATCTCTTACG
GGTGGTAAAG CAAAAAACCT TGCTTCGAAA ATTGCTAACC GCAGTGGTGT TCTTATAGTT
GATGAAGCCC ATCATGTCGC GGCAACCAGC TGGAGTGACC TTCGCTCGGC GTTCTCCGGA
AAATACACAC TGCAGTTCAC AGCGACACCA TTCCGCGAAG ATGGAAAACT CGTTGATGGG
GACGTCATAT ATAGCTATTC TCTTCGAAAA GCTCAGGAGG ACGGTTACTT TAAGCCGATT
AAGTTTCTTC CTGTTCATGA ACTCCATCAA GATTCTGCTG ATGACGCGAT AGCGCATCTC
GCTTGTAAAA CACTACGTGA AGATCTGGCT GTTGGAAATA ACCACCTAAT CATGGCTCGA
TGTTCAAAAA TTGATAGAGC CCAAGAAATC CTTATGCTTT ATCGAGTGCA TGGATCAGAG
TTCTCTCCTC AAATAATTCA TTCTGAGTTG CAAGATAGTC AAGAGCGTAT CAATCGCTTG
ATAACTGGGG ACAGCCGAAT AGCCGTCTGT GTAAATATGT TGGGTGAAGG ATTTGATTTG
CCACCATTGA AAATAGCGGC ATTACACGAT CCGCAGAAAA GTTTAGCCCC ACTTCTTCAG
TTTACTGGAC GTTTTACTCG AACATCAGGG GAGCACCTTG GTGATGCAAC AGTAATCGCA
AATATTACAG ATACGAATAT ATCCTCTGCG CTTGAACGAC TTTATAGTGA GGACTCTGAT
TGGAATGTGC TACTCAGTGA AATGAGTTCC GAGGCTTCTC GGGATCATGC TCAGCTAGTC
GACTTTTTAA ATTCTTCTAT ATCGCTTGGA GAAGATCGAG AGGATGCTCC TAGTATTTCC
CACCATTTGT TACGTCCAGT ATTTAGCACG CTGACTTACA ATTGTCCTGC ATTTAGCCCG
AAGAAATTTC ATGAAGCAAT ATCCAAAGAT GTTGAGGTGA CACGCGTCTG GTTGCATGTG
GACAGTCAGA CATTGTATTT TGTTACCAGG TCGAAGGTCC GCGTCAAATG GTCTAGATCA
AAAGACCTCG TGGAGACTGA TTGGCATCTC TTTGTTTTAC ACTTCGACGA AAAGCGCAAT
TTACTTTATC TGGCTTCTTC AGACAAAACA TCTAACCATG CGAAACTTGC TGCCGCTGTT
GGAGCAACTA CAATAATTGA TGGAGAGCCA ATTTTTAAGA GTTTGGGGAA TATTGGCAGA
CTTGTATTTA ACAATCTTGG AGTCAGTAAG CATGGTCGAC GGAATCTTAG CTATGCTATG
TATACTGGAG CAAATGTAAG GGATGCATTG ACCTTTGCAG CAGCGCCAGG GTCAAGAAAA
GCAAACTTGA GCGGGTCGGG CTGGGAAAGA GGAAAACACG TGACAATTGG TTGCTCTTAT
AAGGGAAGAG TTTGGTCAAA AGAATCCGGC ACAATACCTC AACTTATTGG CTGGTCAGAG
GCTGTCGGTG AAAAGCTTCT TGATGCAACT ATCACAACAG AGGAGATAAT CGAAAATGTT
CTCATTCCGA TTGAAGTGAC TTCATTACCC GATGGGGAAA TAATGGGAAT TGAATGGCCA
TTTGAAATAC TACGGCAATC GGAGGATCGA GTCGATCTTA GTTTAGGCGG CAAAGAGATA
CCAATTTACC TATGCGATAT TCAACTTAGC TCGGTAGACC GAGCAGGTAA TTCAATAAGG
TTCGAGCTTC TAGACAGTCA GGCAGATGTA CTAGGCACTT TTGATTTGAA AATTGGTGGC
CCGCAGGGAT TCGAGGTTGT TCGAGTTTCG GACGAAGAAA TCATATTTCA CGTAGGGTCT
AAGGAATTTA TAGCAGAATC TTATTTTTCT GACTACCCAC CGTTGGTTAG ATACTTTGAC
CTTACGGAGC TAGACGGAAA CCTCGTACTA CGTCCTGAAA ATCCCTACAA TTTCGAATTG
CCAGAAGATA GTTTAGATCC GTGGGATTGG GTTGGGGTGG ACATTACAAG GGAATCCATT
TGGAAAGATG GCTTTGAAAG GAGGAATTCA GTTCAATGGG CTGCGGCCCA AAAGTTTATC
AATGATGACT TCGAGGTCGT TATTGATGAT GATGGTCCTG GTGAGGCTGC TGATTTAGTG
TGCTTAAAGG AGGAGGCGCA TTTCATACGT CTTGTGCTTG TACATTGTAA ATTTTCAAAA
AGCGAACAGG CGGGGAATAG GGTTGGAGAC GTTGCAGAAG TAGCCTCTCA GGCAATAAGG
TCAGCCAAGT GGGCAGGAAG ATTTAAAGAG CTTTGTCGTC ACATCACAAA TAGAGCTAGA
CGACCGTCAA CGGGCCATCG CACGTTTGTG TTGAATGGAA ACATTGCTGA CGTTAACAAA
TTATTGCGTG CGTCCCGTTT TAAGGAAGTA AGGCCAGAGA TTGTGATCGT ACAGCCCGGG
ATATCTCGAA CAACTGTATC AGGCAGTCAA AAAATGCTGC TGGCAGCGGC TGCATCTTAT
ATCAAAGAGA CTGTAGGTGT TGAGCTCGTT GTCGCTTGTA GCGAATAG
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| Protein sequence | MERTVAVGMK SRSAAIAGTW PRSFRFAAQE YDAQGKPIGD RKGLRPPQLG ALYAIGSHWT
QNSSIATVVM PTGTGKTETM LSALAAFPRG PMVVAVPSKA LRNQTTRKFL TFGLLRKLTL
LPEEVENPIV GLLSKQPGGE NDLAIFEDCN VVVSAMASLT GGKAKNLASK IANRSGVLIV
DEAHHVAATS WSDLRSAFSG KYTLQFTATP FREDGKLVDG DVIYSYSLRK AQEDGYFKPI
KFLPVHELHQ DSADDAIAHL ACKTLREDLA VGNNHLIMAR CSKIDRAQEI LMLYRVHGSE
FSPQIIHSEL QDSQERINRL ITGDSRIAVC VNMLGEGFDL PPLKIAALHD PQKSLAPLLQ
FTGRFTRTSG EHLGDATVIA NITDTNISSA LERLYSEDSD WNVLLSEMSS EASRDHAQLV
DFLNSSISLG EDREDAPSIS HHLLRPVFST LTYNCPAFSP KKFHEAISKD VEVTRVWLHV
DSQTLYFVTR SKVRVKWSRS KDLVETDWHL FVLHFDEKRN LLYLASSDKT SNHAKLAAAV
GATTIIDGEP IFKSLGNIGR LVFNNLGVSK HGRRNLSYAM YTGANVRDAL TFAAAPGSRK
ANLSGSGWER GKHVTIGCSY KGRVWSKESG TIPQLIGWSE AVGEKLLDAT ITTEEIIENV
LIPIEVTSLP DGEIMGIEWP FEILRQSEDR VDLSLGGKEI PIYLCDIQLS SVDRAGNSIR
FELLDSQADV LGTFDLKIGG PQGFEVVRVS DEEIIFHVGS KEFIAESYFS DYPPLVRYFD
LTELDGNLVL RPENPYNFEL PEDSLDPWDW VGVDITRESI WKDGFERRNS VQWAAAQKFI
NDDFEVVIDD DGPGEAADLV CLKEEAHFIR LVLVHCKFSK SEQAGNRVGD VAEVASQAIR
SAKWAGRFKE LCRHITNRAR RPSTGHRTFV LNGNIADVNK LLRASRFKEV RPEIVIVQPG
ISRTTVSGSQ KMLLAAAASY IKETVGVELV VACSE
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