| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5202 |
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| Symbol | rho |
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| ID | 8228812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6271750 |
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| End bp | 6273558 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933051 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003089565 |
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| Protein GI | 255038944 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.722557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACAA TTGATGATTT AAACATTAAG CTTTTATCAG AGCTACGAGA AATAGCGGGT
GCTCTGGGAA TACCCGATCA TGCCAAACTT CCTAAAAAAG AACTGATTAA CCGGATTGTG
TCGCAGCAGG AAGCTCCCGC TTCTGTTGCC GAAATAGCCA CAGCAGAAGC TCCCGCCGGG
GAAATCAACG CAGCCGACGC CGCCGAACCG AAGAAAAAAC GCGCCAGAAG GCCTGTTGAG
GCTACTCCCG TGCCCGTTGC GGTAAATAGC AAAGGCGGAA ATAACCGTCC GGCCCGTAAC
AAAAAAGATA TCAATCAGTC CATGGCTTCT TCTGCACCGT TATTCGATAC GCCTGCCCGC
CAGGAGTTCC CGAAACGCCA GGAAGAAAGG CCTAAAAATA TTGACACTTC GCTCGAAATC
GACGAAGATA ACGACACGCT CAATGATCTC GGCAGAGAGG AAATCGACAC TGCTTCCGAG
GTGGAGGCTA CCACCGAACC GGAAGTAGCC GTGGCAGACA CAGAGGAGGA AAAACCTGCC
GCACAGGCCC AGGAGTCCGC TGGTCAGCCA CGAGAAGAGC GCCAGCCACG CCCCCAGCAT
GAGGGCCAGG AGCGGCACCA GCAGCCTCAG GCTCAGCGTG AAGATCCGTC TTCCAAAATC
AAACGCAACT ATAACAACTA CGTCAGGGAG TTCGACGGAC TGATCGTCAA CGAAGGCGTA
CTCGAAATCA TGCAGGATGG CGGCTACGGC TTCCTTCGCT CTGCGGATTA CAATTACCTC
GCAAGCCCCG ACGATATTTA CGTTTCGCCC TCGCAGATCA AATTGTTCGG TCTGAAAACG
GGTGATACGG TAAAAGGCCA GATCCGCCCG CCGAAAGAAG GTGAGAAATA TTTTGCATTG
CTCCGCGTGG AGACGGTGAA TGGTAAAACC ACCGAAGAAA TCCGCGACCG TATTCCATTT
GAATACCTTA CCCCATTGTT CCCCGACGAA TGTCTGCGCC TGAGCTCGCG CCCGGAACAA
TATTCGACCC GTATTCTCGA CCTCTTTGCA CCCATCGGGA AAGGCCAGCG CGGTATGATC
GTCGCACAGC CTAAAACCGG TAAAACGGTG CTTTTGAAAG AGATTGCAAA TGCCATTACC
CGTAACCACC CCGAAGTGTT CCTGCTGATC CTGCTGATCG ACGAACGCCC GGAAGAGGTA
ACGGACATGC AGCGCAGCGT GCGCGCGGAA GTAATCGCGT CGACATTCGA CGAGCAGGCT
GACCGCCACG TGAAAGTAGC GAGCATTGTT TTGGAAAAGG CCAAAAGAAT GGTGGAGTGC
GGCCACGACG TCGTGATTCT GCTTGACTCC ATCACACGTC TCGCGCGTGC ATACAACACC
GTGGTGCCAT CGTCCGGTAA AATCCTTTCC GGTGGTGTGG ACGCCAATGC ATTGCACAAG
CCGAAACGCT TCTTCGGTGC GGCCCGTAAT GTGGAAAACG GCGGCTCGCT GACCATCATC
GCAACCGCAT TGATCGACAC CGGTTCAAAA ATGGACGAAG TGATCTTCGA AGAATTCAAA
GGAACCGGTA ATATGGAATT GCAGCTCGAC CGCAAGCTGT CCAACAAGCG CGTGTTCCCG
GCTATCGACG TAATGGCGTC CGGTACCCGC CGCGAGGACT TGCTGCTCGA TAAGGAAATC
CTGAAAAAAG TATGGATACT CCGCAAGCAC ATGGCCGATA TGAACGCCAT GGAATCGATG
GACTTCCTGC TAGAACATAT GAAAGGGACA CGGAACAACG AAGAGTTCCT GATCTCGATG
AACCGATAA
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| Protein sequence | MPTIDDLNIK LLSELREIAG ALGIPDHAKL PKKELINRIV SQQEAPASVA EIATAEAPAG
EINAADAAEP KKKRARRPVE ATPVPVAVNS KGGNNRPARN KKDINQSMAS SAPLFDTPAR
QEFPKRQEER PKNIDTSLEI DEDNDTLNDL GREEIDTASE VEATTEPEVA VADTEEEKPA
AQAQESAGQP REERQPRPQH EGQERHQQPQ AQREDPSSKI KRNYNNYVRE FDGLIVNEGV
LEIMQDGGYG FLRSADYNYL ASPDDIYVSP SQIKLFGLKT GDTVKGQIRP PKEGEKYFAL
LRVETVNGKT TEEIRDRIPF EYLTPLFPDE CLRLSSRPEQ YSTRILDLFA PIGKGQRGMI
VAQPKTGKTV LLKEIANAIT RNHPEVFLLI LLIDERPEEV TDMQRSVRAE VIASTFDEQA
DRHVKVASIV LEKAKRMVEC GHDVVILLDS ITRLARAYNT VVPSSGKILS GGVDANALHK
PKRFFGAARN VENGGSLTII ATALIDTGSK MDEVIFEEFK GTGNMELQLD RKLSNKRVFP
AIDVMASGTR REDLLLDKEI LKKVWILRKH MADMNAMESM DFLLEHMKGT RNNEEFLISM
NR
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