Gene Dfer_5182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5182 
Symbol 
ID8228792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6251652 
End bp6253160 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content53% 
IMG OID644933032 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_003089546 
Protein GI255038925 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.875269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.100868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCA ATAAACGTCC CCCTGCCTCG GTACTCTTTA TTTTCGGAGG AAGCGGTGAC 
CTCAACTACC GGAAGCTCAC ACCGGCCCTC TATAACTTGT TCCTCGACAA CTGGATGCCC
GATCAGTTTG CGATCGCGGG TATCGGCCGG AGTGCTTATT CCAATGAAAA ATACCATGAG
CACCTGCTCG ACGGCGTGAC GAAATTCTCA CGTCGGAAAG GCAAGCAAAA TGGCCACTGG
ACGGATTTTA CGCAGCATGT TTCGTACCTG CAAATGGACG GCGACGATGC GGCAGCTTAC
CACAAAATCA CCGATCTGGT AAAAGAAAAG GAAGAAGAAT GGGGAGTTCA TCCCAATGTC
ATATTCTACC TTGCGGTAGC GCCTCAGCTC GTTCCTTCGA TCGCCCAAAA GCTGGGTGCA
TTGAAGATCT GCGGAGAAAA AAGCACTACG CGCATTGTTG TAGAAAAACC ATTCGGTCAT
GACCTGGAAA GTGCCCACGA ACTGAACCTG CTGCTTTCCA GCATGTTCGC CGAGGAACAA
ATATTCCGTA TCGACCATTA TTTGGGTAAA GAAACCGTTC AAAACATCCT GGCATTGCGT
TTCGCGAATG CGTTGTTCGA GCCGCTCTGG AACCGTAACT ACATCGACCA CATCCAGATC
ACCGCTGCCG AAGCAGTAGG CCTGGAAGGT CGCGGAGGCT ATTTCGAGCA CGCAGGTGCA
TTGCGCGACA TGGTGCAGAA CCACATCCTG CAAATCCTCT GTATGATTGC GATGGAGCCG
CCGGTATCGT TCGATGCGAA TGAGATCCGT AACAAAAAAG TGGATGTGCT CAATGCAATC
CGCCGGATCG GTAAAGACCA GGTTCACGAT TTCGCGGTTC GCGGTCAGTA CTCGGGTGGC
TGGAAAAAGG GTGAGAAAGT GGTTGGTTAC CGTCAGGAAG AAGGTGTGAA CCCGCAGTCG
AATATCGATA CATTCGCGGC TGTGAAGTTT TACATCGACA ACTGGCGCTG GCAGGGCGTG
CCTTTCTACG TTCGTACCGG TAAGTACCTG AACCAGAAAG CGACCCACAT TACTTTGCAT
TTCAAACAGG CGCCGCATTA TGCATTCCCG CCTGAGTCTG CTGAAACATG GCGCTCTAAC
CGTCTGACTA TCAGCATTCA ACCTAATATG GACATCAGCA TCCGGTTCCA GGCCAAGCGC
CCGGGACAGA CCATGATGCT CGACCCGGTG GATATGACCT TCGATTACGA CGCAGTTGCC
GGCGAACACG CTCCCGAAGC GTACGAAACG CTGCTTCTGG ACGTGATGGA AGGCGACGCG
ACGCTGTTCA TGCGTAACGA CCAGGTGGAT GCCGCGTGGA GAGTGATCAT GCCGATCCTC
GAAGCATGGG AAAACCGCCC GCCGCAAGAC TTCCCGAATT ACGCACCCGA CTCATGGGGC
CCGGATACGG CCGATGCGCT CATCGCCCGC GATGGTCACA CATGGCTCAA CCTGCCACCA
ACCCCGTAA
 
Protein sequence
MQSNKRPPAS VLFIFGGSGD LNYRKLTPAL YNLFLDNWMP DQFAIAGIGR SAYSNEKYHE 
HLLDGVTKFS RRKGKQNGHW TDFTQHVSYL QMDGDDAAAY HKITDLVKEK EEEWGVHPNV
IFYLAVAPQL VPSIAQKLGA LKICGEKSTT RIVVEKPFGH DLESAHELNL LLSSMFAEEQ
IFRIDHYLGK ETVQNILALR FANALFEPLW NRNYIDHIQI TAAEAVGLEG RGGYFEHAGA
LRDMVQNHIL QILCMIAMEP PVSFDANEIR NKKVDVLNAI RRIGKDQVHD FAVRGQYSGG
WKKGEKVVGY RQEEGVNPQS NIDTFAAVKF YIDNWRWQGV PFYVRTGKYL NQKATHITLH
FKQAPHYAFP PESAETWRSN RLTISIQPNM DISIRFQAKR PGQTMMLDPV DMTFDYDAVA
GEHAPEAYET LLLDVMEGDA TLFMRNDQVD AAWRVIMPIL EAWENRPPQD FPNYAPDSWG
PDTADALIAR DGHTWLNLPP TP